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Items: 1 to 20 of 114

1.

Sequence analysis of a complete 1.66 Mb Prochlorococcus marinus MED4 genome cloned in yeast.

Tagwerker C, Dupont CL, Karas BJ, Ma L, Chuang RY, Benders GA, Ramon A, Novotny M, Montague MG, Venepally P, Brami D, Schwartz A, Andrews-Pfannkoch C, Gibson DG, Glass JI, Smith HO, Venter JC, Hutchison CA 3rd.

Nucleic Acids Res. 2012 Nov 1;40(20):10375-83. doi: 10.1093/nar/gks823. Epub 2012 Aug 31.

2.

The transcriptome landscape of Prochlorococcus MED4 and the factors for stabilizing the core genome.

Wang B, Lu L, Lv H, Jiang H, Qu G, Tian C, Ma Y.

BMC Microbiol. 2014 Jan 18;14:11. doi: 10.1186/1471-2180-14-11.

3.

Gene expression level shapes the amino acid usages in Prochlorococcus marinus MED4.

Banerjee T, Ghosh TC.

J Biomol Struct Dyn. 2006 Apr;23(5):547-54.

PMID:
16494504
4.

Analysis of the 3' ends of tRNA as the cause of insertion sites of foreign DNA in Prochlorococcus.

Liu HL, Zhu J.

J Zhejiang Univ Sci B. 2010 Sep;11(9):708-18. doi: 10.1631/jzus.B0900417.

5.

Cloning whole bacterial genomes in yeast.

Benders GA, Noskov VN, Denisova EA, Lartigue C, Gibson DG, Assad-Garcia N, Chuang RY, Carrera W, Moodie M, Algire MA, Phan Q, Alperovich N, Vashee S, Merryman C, Venter JC, Smith HO, Glass JI, Hutchison CA 3rd.

Nucleic Acids Res. 2010 May;38(8):2558-69. doi: 10.1093/nar/gkq119. Epub 2010 Mar 7.

6.

Cloning the Acholeplasma laidlawii PG-8A genome in Saccharomyces cerevisiae as a yeast centromeric plasmid.

Karas BJ, Tagwerker C, Yonemoto IT, Hutchison CA 3rd, Smith HO.

ACS Synth Biol. 2012 Jan 20;1(1):22-8. doi: 10.1021/sb200013j. Epub 2012 Jan 10.

PMID:
23651007
7.

Whole genome phylogeny of Prochlorococcus marinus group of cyanobacteria: genome alignment and overlapping gene approach.

Prabha R, Singh DP, Gupta SK, Rai A.

Interdiscip Sci. 2014 Jun;6(2):149-57. doi: 10.1007/s12539-013-0024-9. Epub 2014 Jun 17.

PMID:
25172453
8.

Ultraviolet stress delays chromosome replication in light/dark synchronized cells of the marine cyanobacterium Prochlorococcus marinus PCC9511.

Kolowrat C, Partensky F, Mella-Flores D, Le Corguillé G, Boutte C, Blot N, Ratin M, Ferréol M, Lecomte X, Gourvil P, Lennon JF, Kehoe DM, Garczarek L.

BMC Microbiol. 2010 Jul 29;10:204. doi: 10.1186/1471-2180-10-204.

9.

Genomic taxonomy of the genus prochlorococcus.

Thompson CC, Silva GG, Vieira NM, Edwards R, Vicente AC, Thompson FL.

Microb Ecol. 2013 Nov;66(4):752-62. doi: 10.1007/s00248-013-0270-8. Epub 2013 Aug 21.

PMID:
23963220
10.

Environmental sequence data from the Sargasso Sea reveal that the characteristics of genome reduction in Prochlorococcus are not a harbinger for an escalation in genetic drift.

Hu J, Blanchard JL.

Mol Biol Evol. 2009 Jan;26(1):5-13. doi: 10.1093/molbev/msn217. Epub 2008 Oct 8. Erratum in: Mol Biol Evol. 2009 May;26(5):1191.

11.
12.

Accelerated evolution associated with genome reduction in a free-living prokaryote.

Dufresne A, Garczarek L, Partensky F.

Genome Biol. 2005;6(2):R14. Epub 2005 Jan 14.

13.

Creating bacterial strains from genomes that have been cloned and engineered in yeast.

Lartigue C, Vashee S, Algire MA, Chuang RY, Benders GA, Ma L, Noskov VN, Denisova EA, Gibson DG, Assad-Garcia N, Alperovich N, Thomas DW, Merryman C, Hutchison CA 3rd, Smith HO, Venter JC, Glass JI.

Science. 2009 Sep 25;325(5948):1693-6. doi: 10.1126/science.1173759. Epub 2009 Aug 20.

14.

Genomic island variability facilitates Prochlorococcus-virus coexistence.

Avrani S, Wurtzel O, Sharon I, Sorek R, Lindell D.

Nature. 2011 Jun 29;474(7353):604-8. doi: 10.1038/nature10172.

PMID:
21720364
15.

Codon usage patterns and adaptive evolution of marine unicellular cyanobacteria Synechococcus and Prochlorococcus.

Yu T, Li J, Yang Y, Qi L, Chen B, Zhao F, Bao Q, Wu J.

Mol Phylogenet Evol. 2012 Jan;62(1):206-13. doi: 10.1016/j.ympev.2011.09.013. Epub 2011 Oct 21.

PMID:
22040764
16.

Distinct, ecotype-specific genome and proteome signatures in the marine cyanobacteria Prochlorococcus.

Paul S, Dutta A, Bag SK, Das S, Dutta C.

BMC Genomics. 2010 Feb 10;11:103. doi: 10.1186/1471-2164-11-103.

17.

Genomic potential for nitrogen assimilation in uncultivated members of Prochlorococcus from an anoxic marine zone.

Astorga-Eló M, Ramírez-Flandes S, DeLong EF, Ulloa O.

ISME J. 2015 May;9(5):1264-7. doi: 10.1038/ismej.2015.21. Epub 2015 Feb 20. Erratum in: ISME J. 2015 May;9(5):1268.

18.

The challenge of regulation in a minimal photoautotroph: non-coding RNAs in Prochlorococcus.

Steglich C, Futschik ME, Lindell D, Voss B, Chisholm SW, Hess WR.

PLoS Genet. 2008 Aug 29;4(8):e1000173. doi: 10.1371/journal.pgen.1000173. Erratum in: PLoS Genet. 2008 Nov;4(11):. doi:10.1371/annotation/411b74ae-c4ce-43c9-bdd2-60c2bf60e672.

19.

Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome.

Dufresne A, Salanoubat M, Partensky F, Artiguenave F, Axmann IM, Barbe V, Duprat S, Galperin MY, Koonin EV, Le Gall F, Makarova KS, Ostrowski M, Oztas S, Robert C, Rogozin IB, Scanlan DJ, Tandeau de Marsac N, Weissenbach J, Wincker P, Wolf YI, Hess WR.

Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):10020-5. Epub 2003 Aug 13.

20.

Genome streamlining results in loss of robustness of the circadian clock in the marine cyanobacterium Prochlorococcus marinus PCC 9511.

Holtzendorff J, Partensky F, Mella D, Lennon JF, Hess WR, Garczarek L.

J Biol Rhythms. 2008 Jun;23(3):187-99. doi: 10.1177/0748730408316040.

PMID:
18487411
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