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Results: 1 to 20 of 95

1.

Gene Expression Commons: an open platform for absolute gene expression profiling.

Seita J, Sahoo D, Rossi DJ, Bhattacharya D, Serwold T, Inlay MA, Ehrlich LI, Fathman JW, Dill DL, Weissman IL.

PLoS One. 2012;7(7):e40321. doi: 10.1371/journal.pone.0040321. Epub 2012 Jul 18.

PMID:
22815738
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Cross-platform microarray meta-analysis for the mouse jejunum selects novel reference genes with highly uniform levels of expression.

Meyer FR, Grausgruber H, Binter C, Mair GE, Guelly C, Vogl C, Steinborn R.

PLoS One. 2013 May 9;8(5):e63125. doi: 10.1371/journal.pone.0063125. Print 2013.

PMID:
23671661
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Meta-analysis of microarray studies reveals a novel hematopoietic progenitor cell signature and demonstrates feasibility of inter-platform data integration.

Sohal D, Yeatts A, Ye K, Pellagatti A, Zhou L, Pahanish P, Mo Y, Bhagat T, Mariadason J, Boultwood J, Melnick A, Greally J, Verma A.

PLoS One. 2008 Aug 13;3(8):e2965. doi: 10.1371/journal.pone.0002965.

PMID:
18698424
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data.

Chen JJ, Hsueh HM, Delongchamp RR, Lin CJ, Tsai CA.

BMC Bioinformatics. 2007 Oct 25;8:412.

PMID:
17961233
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Evaluation of gene expression data generated from expired Affymetrix GeneChip® microarrays using MAQC reference RNA samples.

Wen Z, Wang C, Shi Q, Huang Y, Su Z, Hong H, Tong W, Shi L.

BMC Bioinformatics. 2010 Oct 7;11 Suppl 6:S10. doi: 10.1186/1471-2105-11-S6-S10.

PMID:
20946593
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

[Transcriptomes for serial analysis of gene expression].

Marti J, Piquemal D, Manchon L, Commes T.

J Soc Biol. 2002;196(4):303-7. Review. French.

PMID:
12645300
[PubMed - indexed for MEDLINE]
7.

Standards in gene expression microarray experiments.

Salit M.

Methods Enzymol. 2006;411:63-78. Review.

PMID:
16939786
[PubMed - indexed for MEDLINE]
8.

RNA expression microarrays (REMs), a high-throughput method to measure differences in gene expression in diverse biological samples.

Rogler CE, Tchaikovskaya T, Norel R, Massimi A, Plescia C, Rubashevsky E, Siebert P, Rogler LE.

Nucleic Acids Res. 2004 Aug 25;32(15):e120.

PMID:
15329382
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study.

Arikawa E, Sun Y, Wang J, Zhou Q, Ning B, Dial SL, Guo L, Yang J.

BMC Genomics. 2008 Jul 11;9:328. doi: 10.1186/1471-2164-9-328.

PMID:
18620571
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

SiPaGene: A new repository for instant online retrieval, sharing and meta-analyses of GeneChip expression data.

Menssen A, Edinger G, Grün JR, Haase U, Baumgrass R, Grützkau A, Radbruch A, Burmester GR, Häupl T.

BMC Genomics. 2009 Mar 5;10:98. doi: 10.1186/1471-2164-10-98.

PMID:
19265543
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Microarray standard data set and figures of merit for comparing data processing methods and experiment designs.

He YD, Dai H, Schadt EE, Cavet G, Edwards SW, Stepaniants SB, Duenwald S, Kleinhanz R, Jones AR, Shoemaker DD, Stoughton RB.

Bioinformatics. 2003 May 22;19(8):956-65.

PMID:
12761058
[PubMed - indexed for MEDLINE]
Free Article
12.

Absolute expression values for mouse transcripts: re-annotation of the READ expression database by the use of CAGE and EST sequence tags.

Kodzius R, Matsumura Y, Kasukawa T, Shimokawa K, Fukuda S, Shiraki T, Nakamura M, Arakawa T, Sasaki D, Kawai J, Harbers M, Carninci P, Hayashizaki Y.

FEBS Lett. 2004 Feb 13;559(1-3):22-6.

PMID:
14960301
[PubMed - indexed for MEDLINE]
13.

Evaluation of external RNA controls for the standardisation of gene expression biomarker measurements.

Devonshire AS, Elaswarapu R, Foy CA.

BMC Genomics. 2010 Nov 24;11:662. doi: 10.1186/1471-2164-11-662.

PMID:
21106083
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Effect of various normalization methods on Applied Biosystems expression array system data.

Barbacioru CC, Wang Y, Canales RD, Sun YA, Keys DN, Chan F, Poulter KA, Samaha RR.

BMC Bioinformatics. 2006 Dec 15;7:533.

PMID:
17173684
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Multiplex cDNA quantification method that facilitates the standardization of gene expression data.

Gotoh O, Murakami Y, Suyama A.

Nucleic Acids Res. 2011 May;39(10):e70. doi: 10.1093/nar/gkr138. Epub 2011 Mar 16.

PMID:
21415008
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Microarray databases: standards and ontologies.

Stoeckert CJ Jr, Causton HC, Ball CA.

Nat Genet. 2002 Dec;32 Suppl:469-73. Review.

PMID:
12454640
[PubMed - indexed for MEDLINE]
17.

Microarray expression profiling: analysis and applications.

Xiang Z, Yang Y, Ma X, Ding W.

Curr Opin Drug Discov Devel. 2003 May;6(3):384-95. Review.

PMID:
12833672
[PubMed - indexed for MEDLINE]
18.

BloodExpress: a database of gene expression in mouse haematopoiesis.

Miranda-Saavedra D, De S, Trotter MW, Teichmann SA, Göttgens B.

Nucleic Acids Res. 2009 Jan;37(Database issue):D873-9. doi: 10.1093/nar/gkn854. Epub 2008 Nov 4.

PMID:
18987008
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'.

Kuhn A, Luthi-Carter R, Delorenzi M.

BMC Bioinformatics. 2008 Jan 17;9:26. doi: 10.1186/1471-2105-9-26.

PMID:
18201381
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Quantitative miRNA expression analysis using fluidigm microfluidics dynamic arrays.

Jang JS, Simon VA, Feddersen RM, Rakhshan F, Schultz DA, Zschunke MA, Lingle WL, Kolbert CP, Jen J.

BMC Genomics. 2011 Mar 9;12:144. doi: 10.1186/1471-2164-12-144.

PMID:
21388556
[PubMed - indexed for MEDLINE]
Free PMC Article

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