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Items: 1 to 20 of 201

1.

Genome-wide nucleosome specificity and directionality of chromatin remodelers.

Yen K, Vinayachandran V, Batta K, Koerber RT, Pugh BF.

Cell. 2012 Jun 22;149(7):1461-73. doi: 10.1016/j.cell.2012.04.036.

2.

The chromatin remodelers RSC and ISW1 display functional and chromatin-based promoter antagonism.

Parnell TJ, Schlichter A, Wilson BG, Cairns BR.

Elife. 2015 Mar 30;4:e06073. doi: 10.7554/eLife.06073.

3.

The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor.

Udugama M, Sabri A, Bartholomew B.

Mol Cell Biol. 2011 Feb;31(4):662-73. doi: 10.1128/MCB.01035-10. Epub 2010 Dec 6.

4.

The RSC chromatin remodelling enzyme has a unique role in directing the accurate positioning of nucleosomes.

Wippo CJ, Israel L, Watanabe S, Hochheimer A, Peterson CL, Korber P.

EMBO J. 2011 Apr 6;30(7):1277-88. doi: 10.1038/emboj.2011.43. Epub 2011 Feb 22.

5.

Yeast Isw1a and Isw1b exhibit similar nucleosome mobilization capacities for mononucleosomes, but differently mobilize dinucleosome templates.

Krajewski WA.

Arch Biochem Biophys. 2014 Mar 15;546:72-80. doi: 10.1016/j.abb.2014.02.003. Epub 2014 Feb 14.

PMID:
24530316
6.

Comparison of the Isw1a, Isw1b, and Isw2 nucleosome disrupting activities.

Krajewski WA.

Biochemistry. 2013 Oct 8;52(40):6940-9. doi: 10.1021/bi400634r. Epub 2013 Sep 27.

PMID:
24050724
7.

A novel mechanism of antagonism between ATP-dependent chromatin remodeling complexes regulates RNR3 expression.

Tomar RS, Psathas JN, Zhang H, Zhang Z, Reese JC.

Mol Cell Biol. 2009 Jun;29(12):3255-65. doi: 10.1128/MCB.01741-08. Epub 2009 Apr 6.

8.

In vivo effects of histone H3 depletion on nucleosome occupancy and position in Saccharomyces cerevisiae.

Gossett AJ, Lieb JD.

PLoS Genet. 2012;8(6):e1002771. doi: 10.1371/journal.pgen.1002771. Epub 2012 Jun 21.

9.

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome.

Zofall M, Persinger J, Kassabov SR, Bartholomew B.

Nat Struct Mol Biol. 2006 Apr;13(4):339-46. Epub 2006 Mar 5.

PMID:
16518397
10.

A compendium of nucleosome and transcript profiles reveals determinants of chromatin architecture and transcription.

van Bakel H, Tsui K, Gebbia M, Mnaimneh S, Hughes TR, Nislow C.

PLoS Genet. 2013 May;9(5):e1003479. doi: 10.1371/journal.pgen.1003479. Epub 2013 May 2.

11.

ISWI and CHD chromatin remodelers bind promoters but act in gene bodies.

Zentner GE, Tsukiyama T, Henikoff S.

PLoS Genet. 2013;9(2):e1003317. doi: 10.1371/journal.pgen.1003317. Epub 2013 Feb 28.

12.

Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes.

Stockdale C, Flaus A, Ferreira H, Owen-Hughes T.

J Biol Chem. 2006 Jun 16;281(24):16279-88. Epub 2006 Apr 10.

13.

SWR-C and INO80 chromatin remodelers recognize nucleosome-free regions near +1 nucleosomes.

Yen K, Vinayachandran V, Pugh BF.

Cell. 2013 Sep 12;154(6):1246-56. doi: 10.1016/j.cell.2013.08.043.

14.

Chromatin remodelers clear nucleosomes from intrinsically unfavorable sites to establish nucleosome-depleted regions at promoters.

Tolkunov D, Zawadzki KA, Singer C, Elfving N, Morozov AV, Broach JR.

Mol Biol Cell. 2011 Jun 15;22(12):2106-18. doi: 10.1091/mbc.E10-10-0826. Epub 2011 Apr 20.

15.

Nucleosome recognition and spacing by chromatin remodelling factor ISW1a.

Richmond TJ.

Biochem Soc Trans. 2012 Apr;40(2):347-50. doi: 10.1042/BST20110748. Erratum in: Biochem Soc Trans. 2012 Jun 1;40(3):595.

PMID:
22435810
16.

Widespread remodeling of mid-coding sequence nucleosomes by Isw1.

Tirosh I, Sigal N, Barkai N.

Genome Biol. 2010;11(5):R49. doi: 10.1186/gb-2010-11-5-r49. Epub 2010 May 10.

17.

Chromatin remodelling at promoters suppresses antisense transcription.

Whitehouse I, Rando OJ, Delrow J, Tsukiyama T.

Nature. 2007 Dec 13;450(7172):1031-5.

PMID:
18075583
18.

Interaction of transcriptional regulators with specific nucleosomes across the Saccharomyces genome.

Koerber RT, Rhee HS, Jiang C, Pugh BF.

Mol Cell. 2009 Sep 24;35(6):889-902. doi: 10.1016/j.molcel.2009.09.011.

19.
20.

A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization.

Gkikopoulos T, Schofield P, Singh V, Pinskaya M, Mellor J, Smolle M, Workman JL, Barton GJ, Owen-Hughes T.

Science. 2011 Sep 23;333(6050):1758-60. doi: 10.1126/science.1206097.

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