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Results: 1 to 20 of 130

1.

Comparative study of workflows optimized for in-gel, in-solution, and on-filter proteolysis in the analysis of plasma membrane proteins.

Choksawangkarn W, Edwards N, Wang Y, Gutierrez P, Fenselau C.

J Proteome Res. 2012 May 4;11(5):3030-4. doi: 10.1021/pr300188b. Epub 2012 Apr 13.

PMID:
22500775
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

High-throughput analysis of rat liver plasma membrane proteome by a nonelectrophoretic in-gel tryptic digestion coupled with mass spectrometry identification.

Cao R, He Q, Zhou J, He Q, Liu Z, Wang X, Chen P, Xie J, Liang S.

J Proteome Res. 2008 Feb;7(2):535-45. doi: 10.1021/pr070411f. Epub 2008 Jan 1.

PMID:
18166008
[PubMed - indexed for MEDLINE]
3.

Evaluation of the application of sodium deoxycholate to proteomic analysis of rat hippocampal plasma membrane.

Zhou J, Zhou T, Cao R, Liu Z, Shen J, Chen P, Wang X, Liang S.

J Proteome Res. 2006 Oct;5(10):2547-53.

PMID:
17022626
[PubMed - indexed for MEDLINE]
4.

Gel-absorption-based sample preparation method for shotgun analysis of membrane proteome.

Wang X, Liang S.

Methods Mol Biol. 2012;869:385-92. doi: 10.1007/978-1-61779-821-4_31.

PMID:
22585502
[PubMed - indexed for MEDLINE]
5.

Shotgun analysis of membrane proteomes by an improved SDS-assisted sample preparation method coupled with liquid chromatography-tandem mass spectrometry.

Lin Y, Jiang H, Yan Y, Peng B, Chen J, Lin H, Liu Z.

J Chromatogr B Analyt Technol Biomed Life Sci. 2012 Dec 12;911:6-14. doi: 10.1016/j.jchromb.2012.10.016. Epub 2012 Oct 23.

PMID:
23217299
[PubMed - indexed for MEDLINE]
6.

Dual matrix-based immobilized trypsin for complementary proteolytic digestion and fast proteomics analysis with higher protein sequence coverage.

Fan C, Shi Z, Pan Y, Song Z, Zhang W, Zhao X, Tian F, Peng B, Qin W, Cai Y, Qian X.

Anal Chem. 2014 Feb 4;86(3):1452-8. doi: 10.1021/ac402696b. Epub 2014 Jan 21.

PMID:
24447065
[PubMed - indexed for MEDLINE]
7.

Evaluation of the combinative application of SDS and sodium deoxycholate to the LC-MS-based shotgun analysis of membrane proteomes.

Lin Y, Wang K, Yan Y, Lin H, Peng B, Liu Z.

J Sep Sci. 2013 Sep;36(18):3026-34. doi: 10.1002/jssc.201300413. Epub 2013 Aug 2.

PMID:
23832743
[PubMed - indexed for MEDLINE]
8.

Shotgun analysis of membrane proteomes using a novel combinative strategy of solution-based sample preparation coupled with liquid chromatography-tandem mass spectrometry.

Lin Y, Liu H, Liu Z, Wang X, Liang S.

J Chromatogr B Analyt Technol Biomed Life Sci. 2012 Jul 15;901:18-24. doi: 10.1016/j.jchromb.2012.05.035. Epub 2012 Jun 4.

PMID:
22721709
[PubMed - indexed for MEDLINE]
9.

Quantitative assessment of in-solution digestion efficiency identifies optimal protocols for unbiased protein analysis.

León IR, Schwämmle V, Jensen ON, Sprenger RR.

Mol Cell Proteomics. 2013 Oct;12(10):2992-3005. doi: 10.1074/mcp.M112.025585. Epub 2013 Jun 21.

PMID:
23792921
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Optimized proteomic analysis of rat liver microsomes using dual enzyme digestion with 2D-LC-MS/MS.

Golizeh M, Sleno L.

J Proteomics. 2013 Apr 26;82:166-78. doi: 10.1016/j.jprot.2013.02.001. Epub 2013 Feb 20.

PMID:
23454493
[PubMed - indexed for MEDLINE]
11.

Top-down and bottom-up proteomics of SDS-containing solutions following mass-based separation.

Botelho D, Wall MJ, Vieira DB, Fitzsimmons S, Liu F, Doucette A.

J Proteome Res. 2010 Jun 4;9(6):2863-70. doi: 10.1021/pr900949p.

PMID:
20377267
[PubMed - indexed for MEDLINE]
12.

Comparison of detergent-based sample preparation workflows for LTQ-Orbitrap analysis of the Escherichia coli proteome.

Tanca A, Biosa G, Pagnozzi D, Addis MF, Uzzau S.

Proteomics. 2013 Sep;13(17):2597-607. doi: 10.1002/pmic.201200478. Epub 2013 Aug 7.

PMID:
23784971
[PubMed - indexed for MEDLINE]
13.

Sodium laurate, a novel protease- and mass spectrometry-compatible detergent for mass spectrometry-based membrane proteomics.

Lin Y, Huo L, Liu Z, Li J, Liu Y, He Q, Wang X, Liang S.

PLoS One. 2013;8(3):e59779. doi: 10.1371/journal.pone.0059779. Epub 2013 Mar 28.

PMID:
23555778
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Tube-gel digestion: a novel proteomic approach for high throughput analysis of membrane proteins.

Lu X, Zhu H.

Mol Cell Proteomics. 2005 Dec;4(12):1948-58. Epub 2005 Sep 8.

PMID:
16150870
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Gel absorption-based sample preparation for the analysis of membrane proteome by mass spectrometry.

Zhou J, Xiong J, Li J, Huang S, Zhang H, He Q, Lin Y, Chen P, Wang X, Liang S.

Anal Biochem. 2010 Sep 15;404(2):204-10. doi: 10.1016/j.ab.2010.05.013. Epub 2010 Jun 10.

PMID:
20494643
[PubMed - indexed for MEDLINE]
16.

Comparison of surfactant-assisted shotgun methods using acid-labile surfactants and sodium dodecyl sulfate for membrane proteome analysis.

Wu F, Sun D, Wang N, Gong Y, Li L.

Anal Chim Acta. 2011 Jul 18;698(1-2):36-43. doi: 10.1016/j.aca.2011.04.039. Epub 2011 Apr 28.

PMID:
21645657
[PubMed - indexed for MEDLINE]
17.

Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS.

Zhang N, Chen R, Young N, Wishart D, Winter P, Weiner JH, Li L.

Proteomics. 2007 Feb;7(4):484-93.

PMID:
17309111
[PubMed - indexed for MEDLINE]
18.

Improved recovery and identification of membrane proteins from rat hepatic cells using a centrifugal proteomic reactor.

Zhou H, Wang F, Wang Y, Ning Z, Hou W, Wright TG, Sundaram M, Zhong S, Yao Z, Figeys D.

Mol Cell Proteomics. 2011 Oct;10(10):O111.008425. doi: 10.1074/mcp.O111.008425. Epub 2011 Jul 12.

PMID:
21749988
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Improved mass spectrometric identification of gel-separated hydrophobic membrane proteins after sodium dodecyl sulfate removal by ion-pair extraction.

Zischka H, Gloeckner CJ, Klein C, Willmann S, Swiatek-de Lange M, Ueffing M.

Proteomics. 2004 Dec;4(12):3776-82.

PMID:
15540170
[PubMed - indexed for MEDLINE]
20.

Chemical cleavage-assisted tryptic digestion for membrane proteome analysis.

Iwasaki M, Masuda T, Tomita M, Ishihama Y.

J Proteome Res. 2009 Jun;8(6):3169-75. doi: 10.1021/pr900074n.

PMID:
19348461
[PubMed - indexed for MEDLINE]

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