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Items: 1 to 20 of 87

1.

Associations between HIV and human pathways revealed by protein-protein interactions and correlated gene expression profiles.

Chen KC, Wang TY, Chan CH.

PLoS One. 2012;7(3):e34240. doi: 10.1371/journal.pone.0034240. Epub 2012 Mar 27.

2.

A logical model of HIV-1 interactions with the T-cell activation signalling pathway.

Oyeyemi OJ, Davies O, Robertson DL, Schwartz JM.

Bioinformatics. 2015 Apr 1;31(7):1075-83. doi: 10.1093/bioinformatics/btu787. Epub 2014 Nov 26.

3.

Proteomic characterization of HIV-modulated membrane receptors, kinases and signaling proteins involved in novel angiogenic pathways.

Rasheed S, Yan JS, Hussain A, Lai B.

J Transl Med. 2009 Aug 27;7:75. doi: 10.1186/1479-5876-7-75.

4.

Mining quasi-bicliques from HIV-1-human protein interaction network: a multiobjective biclustering approach.

Maulik U, Mukhopadhyay A, Bhattacharyya M, Kaderali L, Brors B, Bandyopadhyay S, Eils R.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Mar-Apr;10(2):423-35. doi: 10.1109/TCBB.2012.139.

PMID:
23929866
5.

Patterns of HIV-1 protein interaction identify perturbed host-cellular subsystems.

MacPherson JI, Dickerson JE, Pinney JW, Robertson DL.

PLoS Comput Biol. 2010 Jul 29;6(7):e1000863. doi: 10.1371/journal.pcbi.1000863.

6.

Computational analysis of HIV-1 resistance based on gene expression profiles and the virus-host interaction network.

Huang T, Xu Z, Chen L, Cai YD, Kong X.

PLoS One. 2011 Mar 4;6(3):e17291. doi: 10.1371/journal.pone.0017291.

7.

Comparative analysis of protein interaction networks reveals that conserved pathways are susceptible to HIV-1 interception.

Qian X, Yoon BJ.

BMC Bioinformatics. 2011 Feb 15;12 Suppl 1:S19. doi: 10.1186/1471-2105-12-S1-S19.

8.

Structural similarity-based predictions of protein interactions between HIV-1 and Homo sapiens.

Doolittle JM, Gomez SM.

Virol J. 2010 Apr 28;7:82. doi: 10.1186/1743-422X-7-82.

9.

Quantitative inference of dynamic regulatory pathways via microarray data.

Chang WC, Li CW, Chen BS.

BMC Bioinformatics. 2005 Mar 7;6:44.

10.
11.

Alternative paths in HIV-1 targeted human signal transduction pathways.

Balakrishnan S, Tastan O, Carbonell J, Klein-Seetharaman J.

BMC Genomics. 2009 Dec 3;10 Suppl 3:S30. doi: 10.1186/1471-2164-10-S3-S30.

12.

Identification of common biological pathways and drug targets across multiple respiratory viruses based on human host gene expression analysis.

Smith SB, Dampier W, Tozeren A, Brown JR, Magid-Slav M.

PLoS One. 2012;7(3):e33174. doi: 10.1371/journal.pone.0033174. Epub 2012 Mar 14.

13.

Gene chromosomal organization and expression in cultured human neurons exposed to cocaine and HIV-1 proteins gp120 and tat: drug abuse and NeuroAIDS.

Shapshak P, Duncan R, Nath A, Turchan J, Pandjassarame K, Rodriguez H, Duran EM, Ziegler F, Amaro E, Lewis A, Rodriguez A, Minagar A, Davis W, Seth R, Elkomy FF, Chiappelli F, Kazic T.

Front Biosci. 2006 May 1;11:1774-93.

PMID:
16368555
14.

Identifying potential survival strategies of HIV-1 through virus-host protein interaction networks.

van Dijk D, Ertaylan G, Boucher CA, Sloot PM.

BMC Syst Biol. 2010 Jul 15;4:96. doi: 10.1186/1752-0509-4-96.

16.

An integrated map of HIV-human protein complexes that facilitate viral infection.

Emig-Agius D, Olivieri K, Pache L, Shih HL, Pustovalova O, Bessarabova M, Young JA, Chanda SK, Ideker T.

PLoS One. 2014 May 9;9(5):e96687. doi: 10.1371/journal.pone.0096687. eCollection 2014.

17.

CAPIH: a Web interface for comparative analyses and visualization of host-HIV protein-protein interactions.

Lin FK, Pan CL, Yang JM, Chuang TJ, Chen FC.

BMC Microbiol. 2009 Aug 12;9:164. doi: 10.1186/1471-2180-9-164.

18.

Methamphetamine modulates gene expression patterns in monocyte derived mature dendritic cells: implications for HIV-1 pathogenesis.

Mahajan SD, Hu Z, Reynolds JL, Aalinkeel R, Schwartz SA, Nair MP.

Mol Diagn Ther. 2006;10(4):257-69.

PMID:
16884330
19.

Analytic approaches to differential gene expression in AIDS versus control brains.

Shapshak P, Duncan R, Torres-Munoz JE, Duran EM, Minagar A, Petito CK.

Front Biosci. 2004 Sep 1;9:2935-46.

PMID:
15353327
20.

HIV-1 burden influences host response to co-infection with Neisseria gonorrhoeae in vitro.

Montano M, Rarick M, Sebastiani P, Brinkmann P, Skefos J, Ericksen R.

Int Immunol. 2006 Jan;18(1):125-37. Epub 2005 Dec 13.

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