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Items: 1 to 20 of 100

1.

FluReF, an automated flu virus reassortment finder based on phylogenetic trees.

Yurovsky A, Moret BM.

BMC Genomics. 2011;12 Suppl 2:S3. doi: 10.1186/1471-2164-12-S2-S3. Epub 2011 Jul 27.

2.

GiRaF: robust, computational identification of influenza reassortments via graph mining.

Nagarajan N, Kingsford C.

Nucleic Acids Res. 2011 Mar;39(6):e34. doi: 10.1093/nar/gkq1232. Epub 2010 Dec 21.

3.

A phylogenetic approach to detecting reassortments in viruses with segmented genomes.

Suzuki Y.

Gene. 2010 Sep 15;464(1-2):11-6. doi: 10.1016/j.gene.2010.05.002. Epub 2010 May 28.

PMID:
20546849
4.

New approaches for unravelling reassortment pathways.

Svinti V, Cotton JA, McInerney JO.

BMC Evol Biol. 2013 Jan 1;13:1. doi: 10.1186/1471-2148-13-1.

5.

Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses.

Holmes EC, Ghedin E, Miller N, Taylor J, Bao Y, St George K, Grenfell BT, Salzberg SL, Fraser CM, Lipman DJ, Taubenberger JK.

PLoS Biol. 2005 Sep;3(9):e300. Epub 2005 Jul 26.

6.

Non-random reassortment in human influenza A viruses.

Rabadan R, Levine AJ, Krasnitz M.

Influenza Other Respir Viruses. 2008 Jan;2(1):9-22. doi: 10.1111/j.1750-2659.2007.00030.x.

7.

Reassortment between human A(H3N2) viruses is an important evolutionary mechanism.

Schweiger B, Bruns L, Meixenberger K.

Vaccine. 2006 Nov 10;24(44-46):6683-90. Epub 2006 Jun 16.

PMID:
17030498
8.

Reassortant between human-Like H3N2 and avian H5 subtype influenza A viruses in pigs: a potential public health risk.

Cong Y, Wang G, Guan Z, Chang S, Zhang Q, Yang G, Wang W, Meng Q, Ren W, Wang C, Ding Z.

PLoS One. 2010 Sep 7;5(9):e12591. doi: 10.1371/journal.pone.0012591.

9.

Ubiquitous reassortments in influenza A viruses.

Wan XF, Ozden M, Lin G.

J Bioinform Comput Biol. 2008 Oct;6(5):981-99.

PMID:
18942162
10.

Effect of reassortment on the nucleotide and amino acid changes of human A/H3N2 RNP subunits during 1998-2009.

Wong KK, Bull RA, Stelzer-Braid S, Fennell M, Rawlinson W.

J Clin Virol. 2011 Aug;51(4):270-5. doi: 10.1016/j.jcv.2011.05.013. Epub 2011 Jun 14.

PMID:
21665531
11.

The evolution of human influenza A viruses from 1999 to 2006: a complete genome study.

Bragstad K, Nielsen LP, Fomsgaard A.

Virol J. 2008 Mar 7;5:40. doi: 10.1186/1743-422X-5-40.

12.

Surveillance in Eastern India (2007-2009) revealed reassortment event involving NS and PB1-F2 gene segments among co-circulating influenza A subtypes.

Sarkar M, Chanda S, Chakrabarti S, Mazumdar J, Ganguly A, Chadha MS, Mishra AC, Chawla-Sarkar M.

Virol J. 2012 Jan 5;9:3. doi: 10.1186/1743-422X-9-3.

13.

Intrasubtype reassortments cause adaptive amino acid replacements in H3N2 influenza genes.

Neverov AD, Lezhnina KV, Kondrashov AS, Bazykin GA.

PLoS Genet. 2014 Jan;10(1):e1004037. doi: 10.1371/journal.pgen.1004037. Epub 2014 Jan 9.

14.

Ongoing evolution of swine influenza viruses: a novel reassortant.

Zell R, Bergmann S, Krumbholz A, Wutzler P, D├╝rrwald R.

Arch Virol. 2008;153(11):2085-92. doi: 10.1007/s00705-008-0244-1. Epub 2008 Nov 6.

PMID:
18985274
15.

FluShuffle and FluResort: new algorithms to identify reassorted strains of the influenza virus by mass spectrometry.

Lun AT, Wong JW, Downard KM.

BMC Bioinformatics. 2012 Aug 20;13:208. doi: 10.1186/1471-2105-13-208.

16.

Genomic events contributing to the high prevalence of amantadine-resistant influenza A/H3N2.

Zaraket H, Saito R, Suzuki Y, Suzuki Y, Caperig-Dapat I, Dapat C, Shabana II, Baranovich T, Suzuki H.

Antivir Ther. 2010;15(3):307-19. doi: 10.3851/IMP1538.

PMID:
20516551
17.

Gene segment reassortment between Eurasian and American clades of avian influenza virus in Italy.

Fusaro A, Monne I, Cattoli G, De Nardi R, Salviato A, Moreno Martin A, Capua I, Terregino C.

Arch Virol. 2010;155(1):77-81. doi: 10.1007/s00705-009-0550-2. Epub 2009 Nov 19.

PMID:
19924512
18.

Reassortment networks for investigating the evolution of segmented viruses.

Bokhari SH, Janies DA.

IEEE/ACM Trans Comput Biol Bioinform. 2010 Apr-Jun;7(2):288-98. doi: 10.1109/TCBB.2008.73.

PMID:
20431148
19.

Evidence for persistence of and antiviral resistance and reassortment events in seasonal influenza virus strains circulating in Cambodia.

Fourment M, Mardy S, Channa M, Buchy P.

J Clin Microbiol. 2010 Jan;48(1):295-7. doi: 10.1128/JCM.01687-09. Epub 2009 Nov 4.

20.

Viral reassortment as an information exchange between viral segments.

Greenbaum BD, Li OT, Poon LL, Levine AJ, Rabadan R.

Proc Natl Acad Sci U S A. 2012 Feb 28;109(9):3341-6. doi: 10.1073/pnas.1113300109. Epub 2012 Feb 13.

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