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Results: 1 to 20 of 181

1.

Characterization of the small RNA transcriptome of the diatom, Thalassiosira pseudonana.

Norden-Krichmar TM, Allen AE, Gaasterland T, Hildebrand M.

PLoS One. 2011;6(8):e22870. doi: 10.1371/journal.pone.0022870. Epub 2011 Aug 12.

PMID:
21857960
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Small RNAs derived from longer non-coding RNAs.

Röther S, Meister G.

Biochimie. 2011 Nov;93(11):1905-15. doi: 10.1016/j.biochi.2011.07.032. Epub 2011 Aug 9. Review.

PMID:
21843590
[PubMed - indexed for MEDLINE]
3.

MicroRNAs and other tiny endogenous RNAs in C. elegans.

Ambros V, Lee RC, Lavanway A, Williams PT, Jewell D.

Curr Biol. 2003 May 13;13(10):807-18.

PMID:
12747828
[PubMed - indexed for MEDLINE]
4.

Unique small RNA signatures uncovered in the tammar wallaby genome.

Lindsay J, Carone DM, Brown J, Hall L, Qureshi S, Mitchell SE, Jannetty N, Hannon G, Renfree M, Pask A, O'Neill M, O'Neill R.

BMC Genomics. 2012 Oct 17;13:559. doi: 10.1186/1471-2164-13-559.

PMID:
23075437
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Whole transcriptome analysis of the silicon response of the diatom Thalassiosira pseudonana.

Shrestha RP, Tesson B, Norden-Krichmar T, Federowicz S, Hildebrand M, Allen AE.

BMC Genomics. 2012 Sep 20;13:499. doi: 10.1186/1471-2164-13-499.

PMID:
22994549
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana.

Thamatrakoln K, Korenovska O, Niheu AK, Bidle KD.

Environ Microbiol. 2012 Jan;14(1):67-81. doi: 10.1111/j.1462-2920.2011.02468.x. Epub 2011 Mar 31.

PMID:
21453404
[PubMed - indexed for MEDLINE]
7.

Identification and characterization of microRNAs and endogenous siRNAs in Schistosoma japonicum.

Hao L, Cai P, Jiang N, Wang H, Chen Q.

BMC Genomics. 2010 Jan 21;11:55. doi: 10.1186/1471-2164-11-55.

PMID:
20092619
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

RNA-mediated silencing in Algae: biological roles and tools for analysis of gene function.

Cerutti H, Ma X, Msanne J, Repas T.

Eukaryot Cell. 2011 Sep;10(9):1164-72. doi: 10.1128/EC.05106-11. Epub 2011 Jul 29. Review.

PMID:
21803865
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Computational prediction of microRNAs and their targets from three unicellular algae species with complete genome sequences.

Huang A, Wu X, Wang G, Jia Z, He L.

Can J Microbiol. 2011 Dec;57(12):1052-61. doi: 10.1139/w11-102.

PMID:
22149261
[PubMed - indexed for MEDLINE]
10.

Phytophthora have distinct endogenous small RNA populations that include short interfering and microRNAs.

Fahlgren N, Bollmann SR, Kasschau KD, Cuperus JT, Press CM, Sullivan CM, Chapman EJ, Hoyer JS, Gilbert KB, Grünwald NJ, Carrington JC.

PLoS One. 2013 Oct 21;8(10):e77181. doi: 10.1371/journal.pone.0077181. eCollection 2013.

PMID:
24204767
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Identification of Taxus microRNAs and their targets with high-throughput sequencing and degradome analysis.

Hao DC, Yang L, Xiao PG, Liu M.

Physiol Plant. 2012 Dec;146(4):388-403. doi: 10.1111/j.1399-3054.2012.01668.x. Epub 2012 Jul 25.

PMID:
22708792
[PubMed - indexed for MEDLINE]
12.

Identification and characterization of microRNAs from Phaeodactylum tricornutum by high-throughput sequencing and bioinformatics analysis.

Huang A, He L, Wang G.

BMC Genomics. 2011 Jun 30;12:337. doi: 10.1186/1471-2164-12-337.

PMID:
21718527
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Discovery of plant microRNAs and short-interfering RNAs by deep parallel sequencing.

Chellappan P, Jin H.

Methods Mol Biol. 2009;495:121-32. doi: 10.1007/978-1-59745-477-3_11.

PMID:
19085152
[PubMed - indexed for MEDLINE]
14.

Diversity of endogenous small non-coding RNAs in Oryza sativa.

Chen Z, Zhang J, Kong J, Li S, Fu Y, Li S, Zhang H, Li Y, Zhu Y.

Genetica. 2006 Sep-Nov;128(1-3):21-31.

PMID:
17028937
[PubMed - indexed for MEDLINE]
15.

Gene expression induced by copper stress in the diatom Thalassiosira pseudonana.

Davis AK, Hildebrand M, Palenik B.

Eukaryot Cell. 2006 Jul;5(7):1157-68.

PMID:
16835459
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Identification and classification of small RNAs in transcriptome sequence data.

Langenberger D, Bermudez-Santana CI, Stadler PF, Hoffmann S.

Pac Symp Biocomput. 2010:80-7.

PMID:
19908360
[PubMed - indexed for MEDLINE]
Free Article
17.

A novel class of heat-responsive small RNAs derived from the chloroplast genome of Chinese cabbage (Brassica rapa).

Wang L, Yu X, Wang H, Lu YZ, de Ruiter M, Prins M, He YK.

BMC Genomics. 2011 Jun 3;12:289. doi: 10.1186/1471-2164-12-289.

PMID:
21639890
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Exploration of small non coding RNAs in wheat (Triticum aestivum L.).

Yao Y, Sun Q.

Plant Mol Biol. 2012 Sep;80(1):67-73. doi: 10.1007/s11103-011-9835-4. Epub 2011 Oct 19. Review.

PMID:
22009635
[PubMed - indexed for MEDLINE]
19.

Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis.

Sunkar R, Zhu JK.

Plant Cell. 2004 Aug;16(8):2001-19. Epub 2004 Jul 16.

PMID:
15258262
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Complex repeat structures and novel features in the mitochondrial genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana.

Oudot-Le Secq MP, Green BR.

Gene. 2011 May 1;476(1-2):20-6. doi: 10.1016/j.gene.2011.02.001. Epub 2011 Feb 12.

PMID:
21320580
[PubMed - indexed for MEDLINE]
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