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Similar articles for PubMed (Select 21757610)

1.

Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication.

Heidel AJ, Lawal HM, Felder M, Schilde C, Helps NR, Tunggal B, Rivero F, John U, Schleicher M, Eichinger L, Platzer M, Noegel AA, Schaap P, Glöckner G.

Genome Res. 2011 Nov;21(11):1882-91. doi: 10.1101/gr.121137.111. Epub 2011 Jul 14.

2.

The genome of the social amoeba Dictyostelium discoideum.

Eichinger L, Pachebat JA, Glöckner G, Rajandream MA, Sucgang R, Berriman M, Song J, Olsen R, Szafranski K, Xu Q, Tunggal B, Kummerfeld S, Madera M, Konfortov BA, Rivero F, Bankier AT, Lehmann R, Hamlin N, Davies R, Gaudet P, Fey P, Pilcher K, Chen G, Saunders D, Sodergren E, Davis P, Kerhornou A, Nie X, Hall N, Anjard C, Hemphill L, Bason N, Farbrother P, Desany B, Just E, Morio T, Rost R, Churcher C, Cooper J, Haydock S, van Driessche N, Cronin A, Goodhead I, Muzny D, Mourier T, Pain A, Lu M, Harper D, Lindsay R, Hauser H, James K, Quiles M, Madan Babu M, Saito T, Buchrieser C, Wardroper A, Felder M, Thangavelu M, Johnson D, Knights A, Loulseged H, Mungall K, Oliver K, Price C, Quail MA, Urushihara H, Hernandez J, Rabbinowitsch E, Steffen D, Sanders M, Ma J, Kohara Y, Sharp S, Simmonds M, Spiegler S, Tivey A, Sugano S, White B, Walker D, Woodward J, Winckler T, Tanaka Y, Shaulsky G, Schleicher M, Weinstock G, Rosenthal A, Cox EC, Chisholm RL, Gibbs R, Loomis WF, Platzer M, Kay RR, Williams J, Dear PH, Noegel AA, Barrell B, Kuspa A.

Nature. 2005 May 5;435(7038):43-57.

3.

Comparative genomics of the dictyostelids.

Loomis WF.

Methods Mol Biol. 2013;983:39-58. doi: 10.1007/978-1-62703-302-2_3.

PMID:
23494301
4.

Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum.

Sucgang R, Kuo A, Tian X, Salerno W, Parikh A, Feasley CL, Dalin E, Tu H, Huang E, Barry K, Lindquist E, Shapiro H, Bruce D, Schmutz J, Salamov A, Fey P, Gaudet P, Anjard C, Babu MM, Basu S, Bushmanova Y, van der Wel H, Katoh-Kurasawa M, Dinh C, Coutinho PM, Saito T, Elias M, Schaap P, Kay RR, Henrissat B, Eichinger L, Rivero F, Putnam NH, West CM, Loomis WF, Chisholm RL, Shaulsky G, Strassmann JE, Queller DC, Kuspa A, Grigoriev IV.

Genome Biol. 2011;12(2):R20. doi: 10.1186/gb-2011-12-2-r20. Epub 2011 Feb 28.

5.

DictyBase 2013: integrating multiple Dictyostelid species.

Basu S, Fey P, Pandit Y, Dodson R, Kibbe WA, Chisholm RL.

Nucleic Acids Res. 2013 Jan;41(Database issue):D676-83. doi: 10.1093/nar/gks1064. Epub 2012 Nov 20.

6.

Amino acid repeats cause extraordinary coding sequence variation in the social amoeba Dictyostelium discoideum.

Scala C, Tian X, Mehdiabadi NJ, Smith MH, Saxer G, Stephens K, Buzombo P, Strassmann JE, Queller DC.

PLoS One. 2012;7(9):e46150. doi: 10.1371/journal.pone.0046150. Epub 2012 Sep 28.

7.

The Genome of Dictyostelium discoideum.

Kuspa A, Loomis WF.

Methods Mol Biol. 2006;346:15-30. Review.

PMID:
16957282
8.

Centromere sequence and dynamics in Dictyostelium discoideum.

Glöckner G, Heidel AJ.

Nucleic Acids Res. 2009 Apr;37(6):1809-16. doi: 10.1093/nar/gkp017. Epub 2009 Jan 29.

9.

Mitochondrial genome evolution in the social amoebae.

Heidel AJ, Glöckner G.

Mol Biol Evol. 2008 Jul;25(7):1440-50. doi: 10.1093/molbev/msn088. Epub 2008 Apr 15.

10.

Comparing the Dictyostelium and Entamoeba genomes reveals an ancient split in the Conosa lineage.

Song J, Xu Q, Olsen R, Loomis WF, Shaulsky G, Kuspa A, Sucgang R.

PLoS Comput Biol. 2005 Dec;1(7):e71. Epub 2005 Dec 16.

11.

Conserved gene regulatory function of the carboxy-terminal domain of dictyostelid C-module-binding factor.

Schmith A, Groth M, Ratka J, Gatz S, Spaller T, Siol O, Glöckner G, Winckler T.

Eukaryot Cell. 2013 Mar;12(3):460-8. doi: 10.1128/EC.00329-12. Epub 2013 Jan 25.

12.

Identifying the molecular basis of functions in the transcriptome of the social amoeba Dictyostelium discoideum.

Whitney TJ, Gardner DG, Mott ML, Brandon M.

Genet Mol Res. 2010 Mar 9;9(1):394-415. doi: 10.4238/vol9-1gmr752.

13.

Genomic sequence around butterfly wing development genes: annotation and comparative analysis.

Conceição IC, Long AD, Gruber JD, Beldade P.

PLoS One. 2011;6(8):e23778. doi: 10.1371/journal.pone.0023778. Epub 2011 Aug 31.

14.

Amoebozoa possess lineage-specific globin gene repertoires gained by individual horizontal gene transfers.

Dröge J, Buczek D, Suzuki Y, Makałowski W.

Int J Biol Sci. 2014 Jun 19;10(7):689-701. doi: 10.7150/ijbs.8327. eCollection 2014.

15.

Dictyostelium mobile elements: strategies to amplify in a compact genome.

Winckler T, Dingermann T, Glöckner G.

Cell Mol Life Sci. 2002 Dec;59(12):2097-111. Review.

PMID:
12568336
16.

Non-LTR retrotransposons with unique integration preferences downstream of Dictyostelium discoideum tRNA genes.

Szafranski K, Glöckner G, Dingermann T, Dannat K, Noegel AA, Eichinger L, Rosenthal A, Winckler T.

Mol Gen Genet. 1999 Dec;262(4-5):772-80.

PMID:
10628860
17.

Streamlining and core genome conservation among highly divergent members of the SAR11 clade.

Grote J, Thrash JC, Huggett MJ, Landry ZC, Carini P, Giovannoni SJ, Rappé MS.

MBio. 2012 Sep 18;3(5). pii: e00252-12. doi: 10.1128/mBio.00252-12. Print 2012.

18.
19.

Genetic diversity in the social amoeba Dictyostelium discoideum: population differentiation and cryptic species.

Douglas TE, Kronforst MR, Queller DC, Strassmann JE.

Mol Phylogenet Evol. 2011 Sep;60(3):455-62. doi: 10.1016/j.ympev.2011.05.007. Epub 2011 May 14.

PMID:
21601638
20.

The actinome of Dictyostelium discoideum in comparison to actins and actin-related proteins from other organisms.

Joseph JM, Fey P, Ramalingam N, Liu XI, Rohlfs M, Noegel AA, Müller-Taubenberger A, Glöckner G, Schleicher M.

PLoS One. 2008 Jul 9;3(7):e2654. doi: 10.1371/journal.pone.0002654.

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