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Results: 1 to 20 of 108

Similar articles for PubMed (Select 21668978)

1.

Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta).

Fawcett GL, Raveendran M, Deiros DR, Chen D, Yu F, Harris RA, Ren Y, Muzny DM, Reid JG, Wheeler DA, Worley KC, Shelton SE, Kalin NH, Milosavljevic A, Gibbs R, Rogers J.

BMC Genomics. 2011 Jun 13;12:311. doi: 10.1186/1471-2164-12-311.

2.

Single nucleotide polymorphisms (SNPs) are highly conserved in rhesus (Macaca mulatta) and cynomolgus (Macaca fascicularis) macaques.

Street SL, Kyes RC, Grant R, Ferguson B.

BMC Genomics. 2007 Dec 31;8:480. doi: 10.1186/1471-2164-8-480.

3.

The rhesus macaque is three times as diverse but more closely equivalent in damaging coding variation as compared to the human.

Yuan Q, Zhou Z, Lindell SG, Higley JD, Ferguson B, Thompson RC, Lopez JF, Suomi SJ, Baghal B, Baker M, Mash DC, Barr CS, Goldman D.

BMC Genet. 2012 Jun 29;13:52. doi: 10.1186/1471-2156-13-52.

4.

Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta).

Satkoski JA, Malhi R, Kanthaswamy S, Tito R, Malladi V, Smith D.

BMC Genomics. 2008 May 29;9:256. doi: 10.1186/1471-2164-9-256.

5.

Single nucleotide polymorphisms (SNPs) distinguish Indian-origin and Chinese-origin rhesus macaques (Macaca mulatta).

Ferguson B, Street SL, Wright H, Pearson C, Jia Y, Thompson SL, Allibone P, Dubay CJ, Spindel E, Norgren RB Jr.

BMC Genomics. 2007 Feb 7;8:43.

6.

Genome sequence and global sequence variation map with 5.5 million SNPs in Chinese rhesus macaque.

Fang X, Zhang Y, Zhang R, Yang L, Li M, Ye K, Guo X, Wang J, Su B.

Genome Biol. 2011 Jul 6;12(7):R63. doi: 10.1186/gb-2011-12-7-r63.

7.

4040 SNPs for genomic analysis in the rhesus macaque (Macaca mulatta).

Trask JS, Garnica WT, Kanthaswamy S, Malhi RS, Smith DG.

Genomics. 2011 Nov;98(5):352-8. doi: 10.1016/j.ygeno.2011.08.004. Epub 2011 Aug 31.

8.

Whole-genome sequencing of tibetan macaque (Macaca Thibetana) provides new insight into the macaque evolutionary history.

Fan Z, Zhao G, Li P, Osada N, Xing J, Yi Y, Du L, Silva P, Wang H, Sakate R, Zhang X, Xu H, Yue B, Li J.

Mol Biol Evol. 2014 Jun;31(6):1475-89. doi: 10.1093/molbev/msu104. Epub 2014 Mar 18.

9.

A large-scale SNP-based genomic admixture analysis of the captive rhesus macaque colony at the California National Primate Research Center.

Kanthaswamy S, Trask JS, Ross CT, Kou A, Houghton P, Smith DG, Lerche N.

Am J Primatol. 2012 Aug;74(8):747-57. doi: 10.1002/ajp.22025.

PMID:
24436199
10.

Large-scale polymorphism discovery in macaque G-protein coupled receptors.

Goswami DB, Ogawa LM, Ward JM, Miller GM, Vallender EJ.

BMC Genomics. 2013 Oct 11;14:703. doi: 10.1186/1471-2164-14-703.

11.

Genetic characterization of rhesus macaques (Macaca mulatta) in Nepal.

Kyes RC, Jones-Engel L, Chalise MK, Engel G, Heidrich J, Grant R, Bajimaya SS, McDonough J, Smith DG, Ferguson B.

Am J Primatol. 2006 May;68(5):445-55.

PMID:
16541441
12.
13.

Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques.

Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, Thompson JR, Meng Y, Bai Y, Wang J, Zhuo M, Wang T, Huang Y, Wei L, Li J, Wang Z, Hu H, Yang P, Le L, Stenson PD, Li B, Liu X, Ball EV, An N, Huang Q, Zhang Y, Fan W, Zhang X, Li Y, Wang W, Katze MG, Su B, Nielsen R, Yang H, Wang J, Wang X, Wang J.

Nat Biotechnol. 2011 Oct 16;29(11):1019-23. doi: 10.1038/nbt.1992.

PMID:
22002653
14.

The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta).

Trask JA, Malhi RS, Kanthaswamy S, Johnson J, Garnica WT, Malladi VS, Smith DG.

Primates. 2011 Apr;52(2):129-38. doi: 10.1007/s10329-010-0232-4. Epub 2011 Jan 5.

PMID:
21207104
15.

An initial genetic linkage map of the rhesus macaque (Macaca mulatta) genome using human microsatellite loci.

Rogers J, Garcia R, Shelledy W, Kaplan J, Arya A, Johnson Z, Bergstrom M, Novakowski L, Nair P, Vinson A, Newman D, Heckman G, Cameron J.

Genomics. 2006 Jan;87(1):30-8.

16.

Mitochondrial DNA variation in Chinese and Indian rhesus macaques (Macaca mulatta).

Smith DG, McDonough J.

Am J Primatol. 2005 Jan;65(1):1-25.

PMID:
15645455
17.

Development and validation of a SNP-based assay for inferring the genetic ancestry of rhesus macaques (Macaca mulatta).

Kanthaswamy S, Johnson Z, Trask JS, Smith DG, Ramakrishnan R, Bahk J, Ng J, Wiseman R, Kubisch HM, Vallender EJ, Rogers J, Ferguson B.

Am J Primatol. 2014 Nov;76(11):1105-13. doi: 10.1002/ajp.22290. Epub 2014 Jun 20.

PMID:
24953496
18.

Human expression variation in the mu-opioid receptor is paralleled in rhesus macaque.

Vallender EJ, Priddy CM, Chen GL, Miller GM.

Behav Genet. 2008 Jul;38(4):390-5. doi: 10.1007/s10519-008-9207-2. Epub 2008 Apr 1.

PMID:
18379868
19.

Evolutionary and biomedical insights from the rhesus macaque genome.

Rhesus Macaque Genome Sequencing and Analysis Consortium, Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, Hardison RC, Makova KD, Miller W, Milosavljevic A, Palermo RE, Siepel A, Sikela JM, Attaway T, Bell S, Bernard KE, Buhay CJ, Chandrabose MN, Dao M, Davis C, Delehaunty KD, Ding Y, Dinh HH, Dugan-Rocha S, Fulton LA, Gabisi RA, Garner TT, Godfrey J, Hawes AC, Hernandez J, Hines S, Holder M, Hume J, Jhangiani SN, Joshi V, Khan ZM, Kirkness EF, Cree A, Fowler RG, Lee S, Lewis LR, Li Z, Liu YS, Moore SM, Muzny D, Nazareth LV, Ngo DN, Okwuonu GO, Pai G, Parker D, Paul HA, Pfannkoch C, Pohl CS, Rogers YH, Ruiz SJ, Sabo A, Santibanez J, Schneider BW, Smith SM, Sodergren E, Svatek AF, Utterback TR, Vattathil S, Warren W, White CS, Chinwalla AT, Feng Y, Halpern AL, Hillier LW, Huang X, Minx P, Nelson JO, Pepin KH, Qin X, Sutton GG, Venter E, Walenz BP, Wallis JW, Worley KC, Yang SP, Jones SM, Marra MA, Rocchi M, Schein JE, Baertsch R, Clarke L, Csürös M, Glasscock J, Harris RA, Havlak P, Jackson AR, Jiang H, Liu Y, Messina DN, Shen Y, Song HX, Wylie T, Zhang L, Birney E, Han K, Konkel MK, Lee J, Smit AF, Ullmer B, Wang H, Xing J, Burhans R, Cheng Z, Karro JE, Ma J, Raney B, She X, Cox MJ, Demuth JP, Dumas LJ, Han SG, Hopkins J, Karimpour-Fard A, Kim YH, Pollack JR, Vinar T, Addo-Quaye C, Degenhardt J, Denby A, Hubisz MJ, Indap A, Kosiol C, Lahn BT, Lawson HA, Marklein A, Nielsen R, Vallender EJ, Clark AG, Ferguson B, Hernandez RD, Hirani K, Kehrer-Sawatzki H, Kolb J, Patil S, Pu LL, Ren Y, Smith DG, Wheeler DA, Schenck I, Ball EV, Chen R, Cooper DN, Giardine B, Hsu F, Kent WJ, Lesk A, Nelson DL, O'brien WE, Prüfer K, Stenson PD, Wallace JC, Ke H, Liu XM, Wang P, Xiang AP, Yang F, Barber GP, Haussler D, Karolchik D, Kern AD, Kuhn RM, Smith KE, Zwieg AS.

Science. 2007 Apr 13;316(5822):222-34.

20.

Effects of geographic origin on captive Macaca mulatta mitochondrial DNA variation.

Kanthaswamy S, Smith DG.

Comp Med. 2004 Apr;54(2):193-201.

PMID:
15134366
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