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Items: 1 to 20 of 101

1.

The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood.

Langevin SM, Houseman EA, Christensen BC, Wiencke JK, Nelson HH, Karagas MR, Marsit CJ, Kelsey KT.

Epigenetics. 2011 Jul;6(7):908-19. Epub 2011 Jul 1. Erratum in: Epigenetics. 2012 Jun 1;7(6):668.

2.

Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context.

Christensen BC, Houseman EA, Marsit CJ, Zheng S, Wrensch MR, Wiemels JL, Nelson HH, Karagas MR, Padbury JF, Bueno R, Sugarbaker DJ, Yeh RF, Wiencke JK, Kelsey KT.

PLoS Genet. 2009 Aug;5(8):e1000602. doi: 10.1371/journal.pgen.1000602. Epub 2009 Aug 14.

3.

Recursively partitioned mixture model clustering of DNA methylation data using biologically informed correlation structures.

Koestler DC, Christensen BC, Marsit CJ, Kelsey KT, Houseman EA.

Stat Appl Genet Mol Biol. 2013 Mar 5;12(2):225-40. doi: 10.1515/sagmb-2012-0068.

4.

Integrative DNA methylation and gene expression analyses identify DNA packaging and epigenetic regulatory genes associated with low motility sperm.

Pacheco SE, Houseman EA, Christensen BC, Marsit CJ, Kelsey KT, Sigman M, Boekelheide K.

PLoS One. 2011;6(6):e20280. doi: 10.1371/journal.pone.0020280. Epub 2011 Jun 2.

5.

DNA methylation subgroups and the CpG island methylator phenotype in gastric cancer: a comprehensive profiling approach.

Loh M, Liem N, Vaithilingam A, Lim PL, Sapari NS, Elahi E, Mok ZY, Cheng CL, Yan B, Pang B, Salto-Tellez M, Yong WP, Iacopetta B, Soong R.

BMC Gastroenterol. 2014 Mar 28;14:55. doi: 10.1186/1471-230X-14-55.

6.

Characterization of CpG island DNA methylation of impairment-related genes in a rat model of cognitive aging.

Haberman RP, Quigley CK, Gallagher M.

Epigenetics. 2012 Sep;7(9):1008-19. Epub 2012 Aug 7.

7.

Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters.

Shen L, Kondo Y, Guo Y, Zhang J, Zhang L, Ahmed S, Shu J, Chen X, Waterland RA, Issa JP.

PLoS Genet. 2007 Oct;3(10):2023-36. Epub 2007 Sep 10.

8.

Allele-specific DNA methylation in mouse strains is mainly determined by cis-acting sequences.

Schilling E, El Chartouni C, Rehli M.

Genome Res. 2009 Nov;19(11):2028-35. doi: 10.1101/gr.095562.109. Epub 2009 Aug 17.

9.

[Correlation between DNA methylation of the ABO gene promoter CpG island and leukemia].

Xu H, Bao GQ, Wang BY, Xing HX, Ye SH, Zhang JG, Yu CY, Tan YX, Zhang YP.

Zhongguo Shi Yan Xue Ye Xue Za Zhi. 2008 Apr;16(2):240-6. Chinese.

PMID:
18426641
11.

DNA methylation analysis of chromosome 21 gene promoters at single base pair and single allele resolution.

Zhang Y, Rohde C, Tierling S, Jurkowski TP, Bock C, Santacruz D, Ragozin S, Reinhardt R, Groth M, Walter J, Jeltsch A.

PLoS Genet. 2009 Mar;5(3):e1000438. doi: 10.1371/journal.pgen.1000438. Epub 2009 Mar 27.

12.

Epigenetic variation and human disease.

Issa JP.

J Nutr. 2002 Aug;132(8 Suppl):2388S-2392S. Review.

13.

In utero exposures, infant growth, and DNA methylation of repetitive elements and developmentally related genes in human placenta.

Wilhelm-Benartzi CS, Houseman EA, Maccani MA, Poage GM, Koestler DC, Langevin SM, Gagne LA, Banister CE, Padbury JF, Marsit CJ.

Environ Health Perspect. 2012 Feb;120(2):296-302. doi: 10.1289/ehp.1103927. Epub 2011 Oct 17.

14.

Extensive DNA methylation spanning the Rb promoter in retinoblastoma tumors.

Stirzaker C, Millar DS, Paul CL, Warnecke PM, Harrison J, Vincent PC, Frommer M, Clark SJ.

Cancer Res. 1997 Jun 1;57(11):2229-37.

15.

Methylation of the minimal promoter of an embryonic globin gene silences transcription in primary erythroid cells.

Singal R, Ferris R, Little JA, Wang SZ, Ginder GD.

Proc Natl Acad Sci U S A. 1997 Dec 9;94(25):13724-9.

16.

Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping.

Bock C, Walter J, Paulsen M, Lengauer T.

Nucleic Acids Res. 2008 Jun;36(10):e55. doi: 10.1093/nar/gkn122. Epub 2008 Apr 15.

17.

Symmetric and asymmetric DNA methylation in the human IGF2-H19 imprinted region.

Vu TH, Li T, Nguyen D, Nguyen BT, Yao XM, Hu JF, Hoffman AR.

Genomics. 2000 Mar 1;64(2):132-43.

PMID:
10729220
18.

Validation of nucleolar protein 4 as a novel methylated tumor suppressor gene in head and neck cancer.

Demokan S, Chuang AY, Pattani KM, Sidransky D, Koch W, Califano JA.

Oncol Rep. 2014 Feb;31(2):1014-20. doi: 10.3892/or.2013.2927. Epub 2013 Dec 16.

19.

A methylome-wide study of aging using massively parallel sequencing of the methyl-CpG-enriched genomic fraction from blood in over 700 subjects.

McClay JL, Aberg KA, Clark SL, Nerella S, Kumar G, Xie LY, Hudson AD, Harada A, Hultman CM, Magnusson PK, Sullivan PF, Van Den Oord EJ.

Hum Mol Genet. 2014 Mar 1;23(5):1175-85. doi: 10.1093/hmg/ddt511. Epub 2013 Oct 16.

20.

A novel k-mer mixture logistic regression for methylation susceptibility modeling of CpG dinucleotides in human gene promoters.

Yang Y, Nephew K, Kim S.

BMC Bioinformatics. 2012 Mar 21;13 Suppl 3:S15. doi: 10.1186/1471-2105-13-S3-S15.

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