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Results: 1 to 20 of 127

1.

Complete characterization of the edited transcriptome of the mitochondrion of Physarum polycephalum using deep sequencing of RNA.

Bundschuh R, Altmüller J, Becker C, Nürnberg P, Gott JM.

Nucleic Acids Res. 2011 Aug;39(14):6044-55. doi: 10.1093/nar/gkr180. Epub 2011 Apr 8.

PMID:
21478163
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Discovery of new genes and deletion editing in Physarum mitochondria enabled by a novel algorithm for finding edited mRNAs.

Gott JM, Parimi N, Bundschuh R.

Nucleic Acids Res. 2005 Sep 7;33(16):5063-72. Print 2005.

PMID:
16147990
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Unexpectedly complex editing patterns at dinucleotide insertion sites in Physarum mitochondria.

Byrne EM, Gott JM.

Mol Cell Biol. 2004 Sep;24(18):7821-8.

PMID:
15340046
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Editing of the mitochondrial small subunit rRNA in Physarum polycephalum.

Mahendran R, Spottswood MS, Ghate A, Ling ML, Jeng K, Miller DL.

EMBO J. 1994 Jan 1;13(1):232-40. Erratum in: EMBO J 1994 Mar 15;13(6):1493.

PMID:
8306965
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Insertional editing in isolated Physarum mitochondria is linked to RNA synthesis.

Visomirski-Robic LM, Gott JM.

RNA. 1997 Aug;3(8):821-37.

PMID:
9257642
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Insertional editing in mitochondria of Physarum.

Miller D, Mahendran R, Spottswood M, Costandy H, Wang S, Ling ML, Yang N.

Semin Cell Biol. 1993 Aug;4(4):261-6. Review.

PMID:
7694673
[PubMed - indexed for MEDLINE]
7.

Editing of cytochrome b mRNA in physarum mitochondria.

Wang SS, Mahendran R, Miller DL.

J Biol Chem. 1999 Jan 29;274(5):2725-31.

PMID:
9915803
[PubMed - indexed for MEDLINE]
Free Article
8.

RNA editing of 10 Didymium iridis mitochondrial genes and comparison with the homologous genes in Physarum polycephalum.

Traphagen SJ, Dimarco MJ, Silliker ME.

RNA. 2010 Apr;16(4):828-38. doi: 10.1261/rna.1989310. Epub 2010 Feb 16.

PMID:
20159952
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Comparison of insertional RNA editing in Myxomycetes.

Chen C, Frankhouser D, Bundschuh R.

PLoS Comput Biol. 2012;8(2):e1002400. doi: 10.1371/journal.pcbi.1002400. Epub 2012 Feb 23.

PMID:
22383871
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Cotranscriptional editing of Physarum mitochondrial RNA requires local features of the native template.

Byrne EM, Gott JM.

RNA. 2002 Sep;8(9):1174-85.

PMID:
12358436
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

RNA editing of the coI mRNA throughout the life cycle of Physarum polycephalum.

Rundquist BA, Gott JM.

Mol Gen Genet. 1995 May 10;247(3):306-11.

PMID:
7770035
[PubMed - indexed for MEDLINE]
12.

Non-DNA-templated addition of nucleotides to the 3' end of RNAs by the mitochondrial RNA polymerase of Physarum polycephalum.

Miller ML, Miller DL.

Mol Cell Biol. 2008 Sep;28(18):5795-802. doi: 10.1128/MCB.00356-08. Epub 2008 Jun 23.

PMID:
18573885
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The complete DNA sequence of the mitochondrial genome of Physarum polycephalum.

Takano H, Abe T, Sakurai R, Moriyama Y, Miyazawa Y, Nozaki H, Kawano S, Sasaki N, Kuroiwa T.

Mol Gen Genet. 2001 Jan;264(5):539-45.

PMID:
11212908
[PubMed - indexed for MEDLINE]
14.

A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii.

Grewe F, Herres S, Viehöver P, Polsakiewicz M, Weisshaar B, Knoop V.

Nucleic Acids Res. 2011 Apr;39(7):2890-902. doi: 10.1093/nar/gkq1227. Epub 2010 Dec 7.

PMID:
21138958
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Insertional editing of nascent mitochondrial RNAs in Physarum.

Visomirski-Robic LM, Gott JM.

Proc Natl Acad Sci U S A. 1997 Apr 29;94(9):4324-9.

PMID:
9113988
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Insertional editing of mitochondrial tRNAs of Physarum polycephalum and Didymium nigripes.

Antes T, Costandy H, Mahendran R, Spottswood M, Miller D.

Mol Cell Biol. 1998 Dec;18(12):7521-7.

PMID:
9819437
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Distinct roles for sequences upstream of and downstream from Physarum editing sites.

Rhee AC, Somerlot BH, Parimi N, Gott JM.

RNA. 2009 Sep;15(9):1753-65. doi: 10.1261/rna.1668309. Epub 2009 Jul 15.

PMID:
19605532
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Computational approaches to insertional RNA editing.

Bundschuh R.

Methods Enzymol. 2007;424:173-95.

PMID:
17662841
[PubMed - indexed for MEDLINE]
19.

Accurate and efficient insertional RNA editing in isolated Physarum mitochondria.

Visomirski-Robic LM, Gott JM.

RNA. 1995 Sep;1(7):681-91.

PMID:
7585253
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Two forms of RNA editing are required for tRNA maturation in Physarum mitochondria.

Gott JM, Somerlot BH, Gray MW.

RNA. 2010 Mar;16(3):482-8. doi: 10.1261/rna.1958810. Epub 2010 Jan 27.

PMID:
20106952
[PubMed - indexed for MEDLINE]
Free PMC Article
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