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Results: 1 to 20 of 101

1.

Image-derived, three-dimensional generative models of cellular organization.

Peng T, Murphy RF.

Cytometry A. 2011 May;79(5):383-91. doi: 10.1002/cyto.a.21066. Epub 2011 Apr 6.

PMID:
21472848
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Automated learning of generative models for subcellular location: building blocks for systems biology.

Zhao T, Murphy RF.

Cytometry A. 2007 Dec;71(12):978-90.

PMID:
17972315
[PubMed - indexed for MEDLINE]
Free Article
3.

A graphical model approach to automated classification of protein subcellular location patterns in multi-cell images.

Chen SC, Murphy RF.

BMC Bioinformatics. 2006 Feb 23;7:90.

PMID:
16504075
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Toward the virtual cell: automated approaches to building models of subcellular organization "learned" from microscopy images.

Buck TE, Li J, Rohde GK, Murphy RF.

Bioessays. 2012 Sep;34(9):791-9. doi: 10.1002/bies.201200032. Epub 2012 Jul 10. Review.

PMID:
22777818
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).

Foffi G, Pastore A, Piazza F, Temussi PA.

Phys Biol. 2013 Aug 2;10(4):040301. [Epub ahead of print]

PMID:
23912807
[PubMed - as supplied by publisher]
6.

Communicating subcellular distributions.

Murphy RF.

Cytometry A. 2010 Jul;77(7):686-92. doi: 10.1002/cyto.a.20933. Review.

PMID:
20552685
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Object type recognition for automated analysis of protein subcellular location.

Zhao T, Velliste M, Boland MV, Murphy RF.

IEEE Trans Image Process. 2005 Sep;14(9):1351-9.

PMID:
16190470
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Protein subcellular location pattern classification in cellular images using latent discriminative models.

Li J, Xiong L, Schneider J, Murphy RF.

Bioinformatics. 2012 Jun 15;28(12):i32-9. doi: 10.1093/bioinformatics/bts230.

PMID:
22689776
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Boosting accuracy of automated classification of fluorescence microscope images for location proteomics.

Huang K, Murphy RF.

BMC Bioinformatics. 2004 Jun 18;5:78.

PMID:
15207009
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Visualizing and clustering high throughput sub-cellular localization imaging.

Hamilton NA, Teasdale RD.

BMC Bioinformatics. 2008 Feb 4;9:81. doi: 10.1186/1471-2105-9-81.

PMID:
18241353
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Automated interpretation of protein subcellular location patterns: implications for early cancer detection and assessment.

Murphy RF.

Ann N Y Acad Sci. 2004 May;1020:124-31.

PMID:
15208189
[PubMed - indexed for MEDLINE]
12.

CellOrganizer: Image-derived models of subcellular organization and protein distribution.

Murphy RF.

Methods Cell Biol. 2012;110:179-93. doi: 10.1016/B978-0-12-388403-9.00007-2.

PMID:
22482949
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Location proteomics: systematic determination of protein subcellular location.

Newberg J, Hua J, Murphy RF.

Methods Mol Biol. 2009;500:313-32. doi: 10.1007/978-1-59745-525-1_11.

PMID:
19399439
[PubMed - indexed for MEDLINE]
14.

Automated analysis of protein subcellular location in time series images.

Hu Y, Osuna-Highley E, Hua J, Nowicki TS, Stolz R, McKayle C, Murphy RF.

Bioinformatics. 2010 Jul 1;26(13):1630-6. doi: 10.1093/bioinformatics/btq239. Epub 2010 May 19.

PMID:
20484328
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A framework for the automated analysis of subcellular patterns in human protein atlas images.

Newberg J, Murphy RF.

J Proteome Res. 2008 Jun;7(6):2300-8. doi: 10.1021/pr7007626. Epub 2008 Apr 25.

PMID:
18435555
[PubMed - indexed for MEDLINE]
16.

Comparing the similarity of statistical shape models using the Bhattacharya metric.

Babalola KO, Cootes TF, Patenaude B, Rao A, Jenkinson M.

Med Image Comput Comput Assist Interv. 2006;9(Pt 1):142-50.

PMID:
17354884
[PubMed - indexed for MEDLINE]
17.

BIOCAT: a pattern recognition platform for customizable biological image classification and annotation.

Zhou J, Lamichhane S, Sterne G, Ye B, Peng H.

BMC Bioinformatics. 2013 Oct 4;14:291. doi: 10.1186/1471-2105-14-291.

PMID:
24090164
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A generative model of microtubule distributions, and indirect estimation of its parameters from fluorescence microscopy images.

Shariff A, Murphy RF, Rohde GK.

Cytometry A. 2010 May;77(5):457-66. doi: 10.1002/cyto.a.20854.

PMID:
20104579
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Building generic anatomical models using virtual model cutting and iterative registration.

Xiao M, Soh J, Meruvia-Pastor O, Schmidt E, Hallgrímsson B, Sensen CW.

BMC Med Imaging. 2010 Feb 8;10:5. doi: 10.1186/1471-2342-10-5.

PMID:
20144190
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Automated interpretation of protein subcellular location patterns.

Chen X, Murphy RF.

Int Rev Cytol. 2006;249:193-227. Review.

PMID:
16697284
[PubMed - indexed for MEDLINE]

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