Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 29

1.

Efficient study design for next generation sequencing.

Sampson J, Jacobs K, Yeager M, Chanock S, Chatterjee N.

Genet Epidemiol. 2011 Mar 2. doi: 10.1002/gepi.20575. [Epub ahead of print]

PMID:
21370254
[PubMed - as supplied by publisher]
Free PMC Article
2.

Design of association studies with pooled or un-pooled next-generation sequencing data.

Kim SY, Li Y, Guo Y, Li R, Holmkvist J, Hansen T, Pedersen O, Wang J, Nielsen R.

Genet Epidemiol. 2010 Jul;34(5):479-91. doi: 10.1002/gepi.20501.

PMID:
20552648
[PubMed - indexed for MEDLINE]
3.

Confounded by sequencing depth in association studies of rare alleles.

Garner C.

Genet Epidemiol. 2011 Feb 16. doi: 10.1002/gepi.20574. [Epub ahead of print]

PMID:
21328616
[PubMed - as supplied by publisher]
Free PMC Article
4.

On optimal pooling designs to identify rare variants through massive resequencing.

Lee JS, Choi M, Yan X, Lifton RP, Zhao H.

Genet Epidemiol. 2011 Apr;35(3):139-47. doi: 10.1002/gepi.20561. Epub 2011 Jan 19.

PMID:
21254222
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Coverage tradeoffs and power estimation in the design of whole-genome sequencing experiments for detecting association.

Shen Y, Song R, Pe'er I.

Bioinformatics. 2011 Jul 15;27(14):1995-7. doi: 10.1093/bioinformatics/btr305. Epub 2011 Jun 2.

PMID:
21636589
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Comparison of methods and sampling designs to test for association between rare variants and quantitative traits.

Bacanu SA, Nelson MR, Whittaker JC.

Genet Epidemiol. 2011 Mar 2. doi: 10.1002/gepi.20570. [Epub ahead of print]

PMID:
21370253
[PubMed - as supplied by publisher]
7.

Analysis and Optimal Design for Association Studies Using Next-Generation Sequencing With Case-Control Pools.

Liang WE, Thomas DC, Conti DV.

Genet Epidemiol. 2012 Sep 12. doi: 10.1002/gepi.21681. [Epub ahead of print]

PMID:
22972696
[PubMed - as supplied by publisher]
8.

Design considerations for genetic linkage and association studies.

Nsengimana J, Bishop DT.

Methods Mol Biol. 2012;850:237-62. doi: 10.1007/978-1-61779-555-8_13.

PMID:
22307702
[PubMed - indexed for MEDLINE]
9.

Exome sequencing of a multigenerational human pedigree.

Hedges DJ, Burges D, Powell E, Almonte C, Huang J, Young S, Boese B, Schmidt M, Pericak-Vance MA, Martin E, Zhang X, Harkins TT, Z├╝chner S.

PLoS One. 2009 Dec 14;4(12):e8232. doi: 10.1371/journal.pone.0008232. Erratum in: PLoS One. 2009;4(12). doi: 10.1371/annotation/b0fe9dd5-16e1-4b50-b590-263518fbd5eb. Hedges, Dale [corrected to Hedges, Dale J].

PMID:
20011588
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Power in the phenotypic extremes: a simulation study of power in discovery and replication of rare variants.

Guey LT, Kravic J, Melander O, Burtt NP, Laramie JM, Lyssenko V, Jonsson A, Lindholm E, Tuomi T, Isomaa B, Nilsson P, Almgren P, Kathiresan S, Groop L, Seymour AB, Altshuler D, Voight BF.

Genet Epidemiol. 2011 Feb 9. doi: 10.1002/gepi.20572. [Epub ahead of print]

PMID:
21308769
[PubMed - as supplied by publisher]
11.
12.

Quantitative group testing-based overlapping pool sequencing to identify rare variant carriers.

Cao CC, Li C, Sun X.

BMC Bioinformatics. 2014 Jun 17;15(1):195. [Epub ahead of print]

PMID:
24934981
[PubMed - as supplied by publisher]
Free Article
13.

Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey.

Kerstens HH, Crooijmans RP, Veenendaal A, Dibbits BW, Chin-A-Woeng TF, den Dunnen JT, Groenen MA.

BMC Genomics. 2009 Oct 16;10:479. doi: 10.1186/1471-2164-10-479.

PMID:
19835600
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Preparing a re-sequencing DNA library of 2 cancer candidate genes using the ligation-by-amplification protocol by two PCR reactions.

Su Y, Lin L, Tian G, Chen C, Liu T, Xu X, Qi X, Zhang X, Yang H.

Sci China C Life Sci. 2009 May;52(5):483-91. doi: 10.1007/s11427-009-0066-8. Epub 2009 May 27.

PMID:
19471873
[PubMed - indexed for MEDLINE]
15.

[Exome sequencing and its application].

Zhang X, Li M, Zhang XJ.

Yi Chuan. 2011 Aug;33(8):847-56. Review. Chinese.

PMID:
21831801
[PubMed - indexed for MEDLINE]
16.

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing.

Cummings CA, Bormann Chung CA, Fang R, Barker M, Brzoska P, Williamson PC, Beaudry J, Matthews M, Schupp J, Wagner DM, Birdsell D, Vogler AJ, Furtado MR, Keim P, Budowle B.

Investig Genet. 2010 Sep 1;1(1):5. doi: 10.1186/2041-2223-1-5.

PMID:
21092340
[PubMed]
Free PMC Article
17.

Rare variant association testing by adaptive combination of P-values.

Lin WY, Lou XY, Gao G, Liu N.

PLoS One. 2014 Jan 15;9(1):e85728. doi: 10.1371/journal.pone.0085728. eCollection 2014.

PMID:
24454922
[PubMed - in process]
Free PMC Article
18.

How to infer reliable diploid genotypes from NGS or traditional sequence data: from basic probability to experimental optimization.

Chenuil A.

J Evol Biol. 2012 May;25(5):949-60. doi: 10.1111/j.1420-9101.2012.02488.x. Epub 2012 Mar 16.

PMID:
22420488
[PubMed - indexed for MEDLINE]
19.

Improving the efficiency of genomic loci capture using oligonucleotide arrays for high throughput resequencing.

Lee H, O'Connor BD, Merriman B, Funari VA, Homer N, Chen Z, Cohn DH, Nelson SF.

BMC Genomics. 2009 Dec 31;10:646. doi: 10.1186/1471-2164-10-646.

PMID:
20043857
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Bar-coded, multiplexed sequencing of targeted DNA regions using the Illumina Genome Analyzer.

Szelinger S, Kurdoglu A, Craig DW.

Methods Mol Biol. 2011;700:89-104. doi: 10.1007/978-1-61737-954-3_7.

PMID:
21204029
[PubMed - indexed for MEDLINE]

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk