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The search for host genetic factors of HIV/AIDS pathogenesis in the post-genome era: progress to date and new avenues for discovery.

Aouizerat BE, Pearce CL, Miaskowski C.

Curr HIV/AIDS Rep. 2011 Mar;8(1):38-44. doi: 10.1007/s11904-010-0065-1. Review.


Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03).

Le Clerc S, Limou S, Coulonges C, Carpentier W, Dina C, Taing L, Delaneau O, Labib T, Sladek R; ANRS Genomic Group, Deveau C, Guillemain H, Ratsimandresy R, Montes M, Spadoni JL, Therwath A, Schächter F, Matsuda F, Gut I, Lelièvre JD, Lévy Y, Froguel P, Delfraissy JF, Hercberg S, Zagury JF.

J Infect Dis. 2009 Oct 15;200(8):1194-201. doi: 10.1086/605892.


Genome-wide association scan in HIV-1-infected individuals identifying variants influencing disease course.

van Manen D, Delaneau O, Kootstra NA, Boeser-Nunnink BD, Limou S, Bol SM, Burger JA, Zwinderman AH, Moerland PD, van 't Slot R, Zagury JF, van 't Wout AB, Schuitemaker H.

PLoS One. 2011;6(7):e22208. doi: 10.1371/journal.pone.0022208. Epub 2011 Jul 21.


Detecting AIDS restriction genes: from candidate genes to genome-wide association discovery.

Hutcheson HB, Lautenberger JA, Nelson GW, Pontius JU, Kessing BD, Winkler CA, Smith MW, Johnson R, Stephens R, Phair J, Goedert JJ, Donfield S, O'Brien SJ.

Vaccine. 2008 Jun 6;26(24):2951-65. doi: 10.1016/j.vaccine.2007.12.054. Epub 2008 Feb 1.


Identifying host targets for drug development with knowledge from genome-wide studies: lessons from HIV-AIDS.

Winkler CA.

Cell Host Microbe. 2008 Apr 17;3(4):203-5. doi: 10.1016/j.chom.2008.04.001. Review.


Genome-wide association studies on HIV susceptibility, pathogenesis and pharmacogenomics.

van Manen D, van 't Wout AB, Schuitemaker H.

Retrovirology. 2012 Aug 24;9:70. doi: 10.1186/1742-4690-9-70. Review.


Genomic approach of AIDS pathogenesis: exhaustive genotyping of the TNFR1 gene in a French AIDS cohort.

Diop G, Spadoni JL, Do H, Hirtzig T, Coulonges C, Labib T, Issing W, Rappaport J, Therwath A, Lathrop M, Matsuda F, Zagury JF.

Biomed Pharmacother. 2005 Sep;59(8):474-80. Erratum in: Biomed Pharmacother. 2005 Dec;59(10):578.


Host genes associated with HIV/AIDS: advances in gene discovery.

An P, Winkler CA.

Trends Genet. 2010 Mar;26(3):119-31. doi: 10.1016/j.tig.2010.01.002. Epub 2010 Feb 10. Review.


Host genomic influences on HIV/AIDS.

O'Brien SJ, Hendrickson SL.

Genome Biol. 2013 Jan 31;14(1):201. doi: 10.1186/gb-2013-14-1-201. Review.


Impact of phenotype definition on genome-wide association signals: empirical evaluation in human immunodeficiency virus type 1 infection.

Evangelou E, Fellay J, Colombo S, Martinez-Picado J, Obel N, Goldstein DB, Telenti A, Ioannidis JP.

Am J Epidemiol. 2011 Jun 1;173(11):1336-42. doi: 10.1093/aje/kwr024. Epub 2011 Apr 13.


The pursuit of genome-wide association studies: where are we now?

Ku CS, Loy EY, Pawitan Y, Chia KS.

J Hum Genet. 2010 Apr;55(4):195-206. doi: 10.1038/jhg.2010.19. Epub 2010 Mar 19. Review.


Association of HLA-C and HCP5 gene regions with the clinical course of HIV-1 infection.

van Manen D, Kootstra NA, Boeser-Nunnink B, Handulle MA, van't Wout AB, Schuitemaker H.

AIDS. 2009 Jan 2;23(1):19-28. doi: 10.1097/QAD.0b013e32831db247. Erratum in: AIDS. 2010 Mar 27;24(6):939.


Human genetic polymorphisms affecting HIV-1 diseases.

Shioda T, Nakayama EE.

Int J Hematol. 2006 Jul;84(1):12-7. Review.


X chromosomal variation is associated with slow progression to AIDS in HIV-1-infected women.

Siddiqui RA, Sauermann U, Altmüller J, Fritzer E, Nothnagel M, Dalibor N, Fellay J, Kaup FJ, Stahl-Hennig C, Nürnberg P, Krawczak M, Platzer M.

Am J Hum Genet. 2009 Aug;85(2):228-39. doi: 10.1016/j.ajhg.2009.07.013.


Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02).

Limou S, Le Clerc S, Coulonges C, Carpentier W, Dina C, Delaneau O, Labib T, Taing L, Sladek R, Deveau C, Ratsimandresy R, Montes M, Spadoni JL, Lelièvre JD, Lévy Y, Therwath A, Schächter F, Matsuda F, Gut I, Froguel P, Delfraissy JF, Hercberg S, Zagury JF; ANRS Genomic Group.

J Infect Dis. 2009 Feb 1;199(3):419-26. doi: 10.1086/596067.


Identification of homogeneous genetic architecture of multiple genetically correlated traits by block clustering of genome-wide associations.

Gupta M, Cheung CL, Hsu YH, Demissie S, Cupples LA, Kiel DP, Karasik D.

J Bone Miner Res. 2011 Jun;26(6):1261-71. doi: 10.1002/jbmr.333.


First genome-wide study of infectious disease opens new avenues for HIV treatment: vaccines.

[No authors listed]

AIDS Patient Care STDS. 2007 Aug;21(8):607. No abstract available.


[Genetic determinant factors of resistance to HIV infection and of control of progression to AIDS: implications on pathogenesis and therapeutic approaches for the eradication of HIV. A review].

Zúñiga J, Vargas-Alarcón G, Salgado N, Flores C, Martínez-Tripp S, Miranda A, Balbuena A, Osnaya N, Juárez F, Granados J, Reyes-Terán G.

Rev Invest Clin. 2000 May-Jun;52(3):284-95. Review. Spanish.


GWAS Integrator: a bioinformatics tool to explore human genetic associations reported in published genome-wide association studies.

Yu W, Yesupriya A, Wulf A, Hindorff LA, Dowling N, Khoury MJ, Gwinn M.

Eur J Hum Genet. 2011 Oct;19(10):1095-9. doi: 10.1038/ejhg.2011.91. Epub 2011 May 25.

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