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Transcription regulation by the noncoding RNA SRG1 requires Spt2-dependent chromatin deposition in the wake of RNA polymerase II.

Thebault P, Boutin G, Bhat W, Rufiange A, Martens J, Nourani A.

Mol Cell Biol. 2011 Mar;31(6):1288-300. doi: 10.1128/MCB.01083-10. Epub 2011 Jan 10.


The Paf1 complex represses SER3 transcription in Saccharomyces cerevisiae by facilitating intergenic transcription-dependent nucleosome occupancy of the SER3 promoter.

Pruneski JA, Hainer SJ, Petrov KO, Martens JA.

Eukaryot Cell. 2011 Oct;10(10):1283-94. doi: 10.1128/EC.05141-11. Epub 2011 Aug 26.


Intergenic transcription causes repression by directing nucleosome assembly.

Hainer SJ, Pruneski JA, Mitchell RD, Monteverde RM, Martens JA.

Genes Dev. 2011 Jan 1;25(1):29-40. doi: 10.1101/gad.1975011. Epub 2010 Dec 14.


The Rtt106 histone chaperone is functionally linked to transcription elongation and is involved in the regulation of spurious transcription from cryptic promoters in yeast.

Imbeault D, Gamar L, Rufiange A, Paquet E, Nourani A.

J Biol Chem. 2008 Oct 10;283(41):27350-4. doi: 10.1074/jbc.C800147200. Epub 2008 Aug 15.


Transcription elongation factors repress transcription initiation from cryptic sites.

Kaplan CD, Laprade L, Winston F.

Science. 2003 Aug 22;301(5636):1096-9.


Identification of histone mutants that are defective for transcription-coupled nucleosome occupancy.

Hainer SJ, Martens JA.

Mol Cell Biol. 2011 Sep;31(17):3557-68. doi: 10.1128/MCB.05195-11. Epub 2011 Jul 5.


Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene.

Martens JA, Laprade L, Winston F.

Nature. 2004 Jun 3;429(6991):571-4.


Casein kinase 2 associates with the yeast chromatin reassembly factor Spt2/Sin1 to regulate its function in the repression of spurious transcription.

Bhat W, Boutin G, Rufiange A, Nourani A.

Mol Cell Biol. 2013 Nov;33(21):4198-211. doi: 10.1128/MCB.00525-13. Epub 2013 Aug 26.


Histone H3K4 and K36 methylation, Chd1 and Rpd3S oppose the functions of Saccharomyces cerevisiae Spt4-Spt5 in transcription.

Quan TK, Hartzog GA.

Genetics. 2010 Feb;184(2):321-34. doi: 10.1534/genetics.109.111526. Epub 2009 Nov 30.


DSIF and RNA polymerase II CTD phosphorylation coordinate the recruitment of Rpd3S to actively transcribed genes.

Drouin S, Laramée L, Jacques PÉ, Forest A, Bergeron M, Robert F.

PLoS Genet. 2010 Oct 28;6(10):e1001173. doi: 10.1371/journal.pgen.1001173.


Interaction between transcription elongation factors and mRNA 3'-end formation at the Saccharomyces cerevisiae GAL10-GAL7 locus.

Kaplan CD, Holland MJ, Winston F.

J Biol Chem. 2005 Jan 14;280(2):913-22. Epub 2004 Nov 5.


Sub1 associates with Spt5 and influences RNA polymerase II transcription elongation rate.

García A, Collin A, Calvo O.

Mol Biol Cell. 2012 Nov;23(21):4297-312. doi: 10.1091/mbc.E12-04-0331. Epub 2012 Sep 12.


FACT, the Bur kinase pathway, and the histone co-repressor HirC have overlapping nucleosome-related roles in yeast transcription elongation.

Stevens JR, O'Donnell AF, Perry TE, Benjamin JJ, Barnes CA, Johnston GC, Singer RA.

PLoS One. 2011;6(10):e25644. doi: 10.1371/journal.pone.0025644. Epub 2011 Oct 12.


Transcription. Histones face the FACT.

Svejstrup JQ.

Science. 2003 Aug 22;301(5636):1053-5. No abstract available.


H4K16 acetylation affects recombination and ncRNA transcription at rDNA in Saccharomyces cerevisiae.

Cesarini E, D'Alfonso A, Camilloni G.

Mol Biol Cell. 2012 Jul;23(14):2770-81. doi: 10.1091/mbc.E12-02-0095. Epub 2012 May 23.


Histone variant H2A.Z and RNA polymerase II transcription elongation.

Santisteban MS, Hang M, Smith MM.

Mol Cell Biol. 2011 May;31(9):1848-60. doi: 10.1128/MCB.01346-10. Epub 2011 Feb 28.


Isw1 chromatin remodeling ATPase coordinates transcription elongation and termination by RNA polymerase II.

Morillon A, Karabetsou N, O'Sullivan J, Kent N, Proudfoot N, Mellor J.

Cell. 2003 Nov 14;115(4):425-35.


XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.

van Dijk EL, Chen CL, d'Aubenton-Carafa Y, Gourvennec S, Kwapisz M, Roche V, Bertrand C, Silvain M, Legoix-Né P, Loeillet S, Nicolas A, Thermes C, Morillon A.

Nature. 2011 Jun 22;475(7354):114-7. doi: 10.1038/nature10118.

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