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Items: 1 to 20 of 97

1.

Stoichiometric incorporation of base substitutions at specific sites in supercoiled DNA and supercoiled recombination intermediates.

Matovina M, Seah N, Hamilton T, Warren D, Landy A.

Nucleic Acids Res. 2010 Oct;38(18):e175. doi: 10.1093/nar/gkq674. Epub 2010 Aug 6.

2.

Spermidine biases the resolution of Holliday junctions by phage lambda integrase.

Boldt JL, Kepple KV, Cassell GD, Segall AM.

Nucleic Acids Res. 2007;35(3):716-27. Epub 2006 Dec 19.

3.

Capturing reaction paths and intermediates in Cre-loxP recombination using single-molecule fluorescence.

Pinkney JN, Zawadzki P, Mazuryk J, Arciszewska LK, Sherratt DJ, Kapanidis AN.

Proc Natl Acad Sci U S A. 2012 Dec 18;109(51):20871-6. doi: 10.1073/pnas.1211922109. Epub 2012 Nov 26.

4.

Stereoselectivity of DNA catenane fusion by resolvase.

Stark WM, Parker CN, Halford SE, Boocock MR.

Nature. 1994 Mar 3;368(6466):76-8.

PMID:
8107889
5.

Architecture of recombination intermediates visualized by in-gel FRET of lambda integrase-Holliday junction-arm DNA complexes.

Radman-Livaja M, Biswas T, Mierke D, Landy A.

Proc Natl Acad Sci U S A. 2005 Mar 15;102(11):3913-20. Epub 2005 Mar 7.

6.
8.

Method to eliminate linear DNA from mixture containing nicked circular, supercoiled, and linear plasmid DNA.

Balagurumoorthy P, Adelstein SJ, Kassis AI.

Anal Biochem. 2008 Oct 1;381(1):172-4. doi: 10.1016/j.ab.2008.06.037. Epub 2008 Jul 4.

10.

Human placental endonuclease cleaves Holliday junctions.

Jeyaseelan R, Shanmugam G.

Biochem Biophys Res Commun. 1988 Oct 31;156(2):1054-60.

PMID:
2847712
11.

Organization of DNA partners and strand exchange mechanisms during Flp site-specific recombination analyzed by difference topology, single molecule FRET and single molecule TPM.

Ma CH, Liu YT, Savva CG, Rowley PA, Cannon B, Fan HF, Russell R, Holzenburg A, Jayaram M.

J Mol Biol. 2014 Feb 20;426(4):793-815. doi: 10.1016/j.jmb.2013.11.017. Epub 2013 Nov 25.

PMID:
24286749
12.

Effect of DNA supercoiling on the geometry of holliday junctions.

Mikheikin AL, Lushnikov AY, Lyubchenko YL.

Biochemistry. 2006 Oct 31;45(43):12998-3006.

13.

Assays for the preferential binding of human topoisomerase I to supercoiled DNA.

Yang Z, Champoux JJ.

Methods Mol Biol. 2009;582:49-57. doi: 10.1007/978-1-60761-340-4_5.

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16.

Escherichia coli RuvC protein is an endonuclease that resolves the Holliday structure.

Iwasaki H, Takahagi M, Shiba T, Nakata A, Shinagawa H.

EMBO J. 1991 Dec;10(13):4381-9.

17.

Sequential strand exchange by XerC and XerD during site-specific recombination at dif.

Blakely GW, Davidson AO, Sherratt DJ.

J Biol Chem. 2000 Apr 7;275(14):9930-6.

18.

Holliday junction branch migration and resolution assays.

Constantinou A, West SC.

Methods Mol Biol. 2004;262:239-53.

PMID:
14769966
19.

No braiding of Holliday junctions in positively supercoiled DNA molecules.

Sun W, Mao C, Iwasaki H, Kemper B, Seeman NC.

J Mol Biol. 1999 Dec 3;294(3):683-99.

PMID:
10610789
20.

Effect of ethidium on the torsion constants of linear and supercoiled DNAs.

Wu PG, Fujimoto BS, Song L, Schurr JM.

Biophys Chem. 1991 Dec;41(3):217-36.

PMID:
1777574
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