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Results: 1 to 20 of 100

1.

Evolutionary dynamics of Clostridium difficile over short and long time scales.

He M, Sebaihia M, Lawley TD, Stabler RA, Dawson LF, Martin MJ, Holt KE, Seth-Smith HM, Quail MA, Rance R, Brooks K, Churcher C, Harris D, Bentley SD, Burrows C, Clark L, Corton C, Murray V, Rose G, Thurston S, van Tonder A, Walker D, Wren BW, Dougan G, Parkhill J.

Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7527-32. doi: 10.1073/pnas.0914322107. Epub 2010 Apr 5.

PMID:
20368420
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Clostridium difficile using DNA microarrays.

Stabler R, Dawson L, Wren B.

Methods Mol Biol. 2010;646:149-62. doi: 10.1007/978-1-60327-365-7_10.

PMID:
20597008
[PubMed - indexed for MEDLINE]
3.

Comparative analysis of an expanded Clostridium difficile reference strain collection reveals genetic diversity and evolution through six lineages.

Knetsch CW, Terveer EM, Lauber C, Gorbalenya AE, Harmanus C, Kuijper EJ, Corver J, van Leeuwen HC.

Infect Genet Evol. 2012 Oct;12(7):1577-85. doi: 10.1016/j.meegid.2012.06.003. Epub 2012 Jun 15.

PMID:
22705462
[PubMed - indexed for MEDLINE]
4.

Microarray identification of Clostridium difficile core components and divergent regions associated with host origin.

Janvilisri T, Scaria J, Thompson AD, Nicholson A, Limbago BM, Arroyo LG, Songer JG, Gröhn YT, Chang YF.

J Bacteriol. 2009 Jun;191(12):3881-91. doi: 10.1128/JB.00222-09. Epub 2009 Apr 17.

PMID:
19376880
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Multilocus sequence analysis and comparative evolution of virulence-associated genes and housekeeping genes of Clostridium difficile.

Lemée L, Bourgeois I, Ruffin E, Collignon A, Lemeland JF, Pons JL.

Microbiology. 2005 Oct;151(Pt 10):3171-80.

PMID:
16207902
[PubMed - indexed for MEDLINE]
Free Article
6.

Clostridium difficile--a continually evolving and problematic pathogen.

Dawson LF, Valiente E, Wren BW.

Infect Genet Evol. 2009 Dec;9(6):1410-7. doi: 10.1016/j.meegid.2009.06.005. Epub 2009 Jun 16.

PMID:
19539054
[PubMed - indexed for MEDLINE]
7.

Molecular typing and long-term comparison of clostridium difficile strains by pulsed-field gel electrophoresis and PCR-ribotyping.

Spigaglia P, Cardines R, Rossi S, Menozzi MG, Mastrantonio P.

J Med Microbiol. 2001 May;50(5):407-14.

PMID:
11339247
[PubMed - indexed for MEDLINE]
Free Article
8.

Sequence and phylogenetic analysis of the gene for surface layer protein, slpA, from 14 PCR ribotypes of Clostridium difficile.

Eidhin DN, Ryan AW, Doyle RM, Walsh JB, Kelleher D.

J Med Microbiol. 2006 Jan;55(Pt 1):69-83.

PMID:
16388033
[PubMed - indexed for MEDLINE]
Free Article
9.

Macro and micro diversity of Clostridium difficile isolates from diverse sources and geographical locations.

Stabler RA, Dawson LF, Valiente E, Cairns MD, Martin MJ, Donahue EH, Riley TV, Songer JG, Kuijper EJ, Dingle KE, Wren BW.

PLoS One. 2012;7(3):e31559. doi: 10.1371/journal.pone.0031559. Epub 2012 Mar 2.

PMID:
22396735
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Comparative phylogenomics of Clostridium difficile reveals clade specificity and microevolution of hypervirulent strains.

Stabler RA, Gerding DN, Songer JG, Drudy D, Brazier JS, Trinh HT, Witney AA, Hinds J, Wren BW.

J Bacteriol. 2006 Oct;188(20):7297-305.

PMID:
17015669
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Typing Clostridium difficile strains based on tandem repeat sequences.

Zaiss NH, Rupnik M, Kuijper EJ, Harmanus C, Michielsen D, Janssens K, Nübel U.

BMC Microbiol. 2009 Jan 8;9:6. doi: 10.1186/1471-2180-9-6.

PMID:
19133124
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Multilocus sequence typing analysis of human and animal Clostridium difficile isolates of various toxigenic types.

Lemee L, Dhalluin A, Pestel-Caron M, Lemeland JF, Pons JL.

J Clin Microbiol. 2004 Jun;42(6):2609-17.

PMID:
15184441
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

[Clostridium difficile, nosocomial enteropathogen: phylogeny and virulence].

Pons JL.

Ann Pharm Fr. 2004 Sep;62(5):304-9. Review. French.

PMID:
15314577
[PubMed - indexed for MEDLINE]
14.

Emergence and global spread of epidemic healthcare-associated Clostridium difficile.

He M, Miyajima F, Roberts P, Ellison L, Pickard DJ, Martin MJ, Connor TR, Harris SR, Fairley D, Bamford KB, D'Arc S, Brazier J, Brown D, Coia JE, Douce G, Gerding D, Kim HJ, Koh TH, Kato H, Senoh M, Louie T, Michell S, Butt E, Peacock SJ, Brown NM, Riley T, Songer G, Wilcox M, Pirmohamed M, Kuijper E, Hawkey P, Wren BW, Dougan G, Parkhill J, Lawley TD.

Nat Genet. 2013 Jan;45(1):109-13. doi: 10.1038/ng.2478. Epub 2012 Dec 9.

PMID:
23222960
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Lineage specific recombination rates and microevolution in Listeria monocytogenes.

den Bakker HC, Didelot X, Fortes ED, Nightingale KK, Wiedmann M.

BMC Evol Biol. 2008 Oct 8;8:277. doi: 10.1186/1471-2148-8-277.

PMID:
18842152
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Analysis of ultra low genome conservation in Clostridium difficile.

Scaria J, Ponnala L, Janvilisri T, Yan W, Mueller LA, Chang YF.

PLoS One. 2010 Dec 8;5(12):e15147. doi: 10.1371/journal.pone.0015147.

PMID:
21170335
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

New variants of the tet(M) gene in Clostridium difficile clinical isolates harbouring Tn916-like elements.

Spigaglia P, Barbanti F, Mastrantonio P.

J Antimicrob Chemother. 2006 Jun;57(6):1205-9. Epub 2006 Mar 24.

PMID:
16565156
[PubMed - indexed for MEDLINE]
Free Article
18.

Multilocus sequence typing for Clostridium difficile.

Lemée L, Pons JL.

Methods Mol Biol. 2010;646:77-90. doi: 10.1007/978-1-60327-365-7_6.

PMID:
20597004
[PubMed - indexed for MEDLINE]
19.

The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome.

Sebaihia M, Wren BW, Mullany P, Fairweather NF, Minton N, Stabler R, Thomson NR, Roberts AP, Cerdeño-Tárraga AM, Wang H, Holden MT, Wright A, Churcher C, Quail MA, Baker S, Bason N, Brooks K, Chillingworth T, Cronin A, Davis P, Dowd L, Fraser A, Feltwell T, Hance Z, Holroyd S, Jagels K, Moule S, Mungall K, Price C, Rabbinowitsch E, Sharp S, Simmonds M, Stevens K, Unwin L, Whithead S, Dupuy B, Dougan G, Barrell B, Parkhill J.

Nat Genet. 2006 Jul;38(7):779-86. Epub 2006 Jun 25.

PMID:
16804543
[PubMed - indexed for MEDLINE]
20.

Laboratory diagnosis of toxigenic Clostridium difficile by polymerase chain reaction: presence of toxin genes and their stable expression in toxigenic isolates from Japanese individuals.

Karasawa T, Nojiri T, Hayashi Y, Maegawa T, Yamakawa K, Wang XM, Nakamura S.

J Gastroenterol. 1999 Feb;34(1):41-5.

PMID:
10204609
[PubMed - indexed for MEDLINE]

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