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TRAMP complex enhances RNA degradation by the nuclear exosome component Rrp6.

Callahan KP, Butler JS.

J Biol Chem. 2010 Feb 5;285(6):3540-7. doi: 10.1074/jbc.M109.058396. Epub 2009 Dec 2.


Depletion of the yeast nuclear exosome subunit Rrp6 results in accumulation of polyadenylated RNAs in a discrete domain within the nucleolus.

Carneiro T, Carvalho C, Braga J, Rino J, Milligan L, Tollervey D, Carmo-Fonseca M.

Mol Cell Biol. 2007 Jun;27(11):4157-65. Epub 2007 Apr 2.


RNA unwinding by the Trf4/Air2/Mtr4 polyadenylation (TRAMP) complex.

Jia H, Wang X, Anderson JT, Jankowsky E.

Proc Natl Acad Sci U S A. 2012 May 8;109(19):7292-7. doi: 10.1073/pnas.1201085109. Epub 2012 Apr 24.


Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex.

Fasken MB, Leung SW, Banerjee A, Kodani MO, Chavez R, Bowman EA, Purohit MK, Rubinson ME, Rubinson EH, Corbett AH.

J Biol Chem. 2011 Oct 28;286(43):37429-45. doi: 10.1074/jbc.M111.271494. Epub 2011 Aug 30.


Structural analysis reveals the characteristic features of Mtr4, a DExH helicase involved in nuclear RNA processing and surveillance.

Weir JR, Bonneau F, Hentschel J, Conti E.

Proc Natl Acad Sci U S A. 2010 Jul 6;107(27):12139-44. doi: 10.1073/pnas.1004953107. Epub 2010 Jun 21.


RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.

LaCava J, Houseley J, Saveanu C, Petfalski E, Thompson E, Jacquier A, Tollervey D.

Cell. 2005 Jun 3;121(5):713-24.


The RNA helicase Mtr4p modulates polyadenylation in the TRAMP complex.

Jia H, Wang X, Liu F, Guenther UP, Srinivasan S, Anderson JT, Jankowsky E.

Cell. 2011 Jun 10;145(6):890-901. doi: 10.1016/j.cell.2011.05.010.


Dis3-like 1: a novel exoribonuclease associated with the human exosome.

Staals RH, Bronkhorst AW, Schilders G, Slomovic S, Schuster G, Heck AJ, Raijmakers R, Pruijn GJ.

EMBO J. 2010 Jul 21;29(14):2358-67. doi: 10.1038/emboj.2010.122. Epub 2010 Jun 8.


Regulation of NAB2 mRNA 3'-end formation requires the core exosome and the Trf4p component of the TRAMP complex.

Roth KM, Byam J, Fang F, Butler JS.

RNA. 2009 Jun;15(6):1045-58. doi: 10.1261/rna.709609. Epub 2009 Apr 15.


The nuclear exosome is active and important during budding yeast meiosis.

Frenk S, Oxley D, Houseley J.

PLoS One. 2014 Sep 11;9(9):e107648. doi: 10.1371/journal.pone.0107648. eCollection 2014.


Distinct roles of non-canonical poly(A) polymerases in RNA metabolism.

San Paolo S, Vanacova S, Schenk L, Scherrer T, Blank D, Keller W, Gerber AP.

PLoS Genet. 2009 Jul;5(7):e1000555. doi: 10.1371/journal.pgen.1000555. Epub 2009 Jul 10.


Nuclear RNA surveillance: role of TRAMP in controlling exosome specificity.

Schmidt K, Butler JS.

Wiley Interdiscip Rev RNA. 2013 Mar-Apr;4(2):217-31. doi: 10.1002/wrna.1155. Epub 2013 Feb 15. Review.


Genetic interactions suggest multiple distinct roles of the arch and core helicase domains of Mtr4 in Rrp6 and exosome function.

Klauer AA, van Hoof A.

Nucleic Acids Res. 2013 Jan 7;41(1):533-41. doi: 10.1093/nar/gks1013. Epub 2012 Nov 9.


Rat1p and Rai1p function with the nuclear exosome in the processing and degradation of rRNA precursors.

Fang F, Phillips S, Butler JS.

RNA. 2005 Oct;11(10):1571-8. Epub 2005 Aug 30.


The exosome subunit Rrp44 plays a direct role in RNA substrate recognition.

Schneider C, Anderson JT, Tollervey D.

Mol Cell. 2007 Jul 20;27(2):324-31.


Rrp47 functions in RNA surveillance and stable RNA processing when divorced from the exoribonuclease and exosome-binding domains of Rrp6.

Garland W, Feigenbutz M, Turner M, Mitchell P.

RNA. 2013 Dec;19(12):1659-68. doi: 10.1261/rna.039388.113. Epub 2013 Oct 8.


5-fluorouracil enhances exosome-dependent accumulation of polyadenylated rRNAs.

Fang F, Hoskins J, Butler JS.

Mol Cell Biol. 2004 Dec;24(24):10766-76.


Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants.

Rougemaille M, Gudipati RK, Olesen JR, Thomsen R, Seraphin B, Libri D, Jensen TH.

EMBO J. 2007 May 2;26(9):2317-26. Epub 2007 Apr 5.

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