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Results: 1 to 20 of 85

1.

Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species.

Genome 10K Community of Scientists.

J Hered. 2009 Nov-Dec;100(6):659-74. doi: 10.1093/jhered/esp086. Epub 2009 Nov 5.

PMID:
19892720
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The fishes of Genome 10K.

Bernardi G, Wiley EO, Mansour H, Miller MR, Orti G, Haussler D, O'Brien SJ, Ryder OA, Venkatesh B.

Mar Genomics. 2012 Sep;7:3-6. doi: 10.1016/j.margen.2012.02.002. Epub 2012 Mar 24.

PMID:
22897955
[PubMed - indexed for MEDLINE]
3.

Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Lineage-specific expansions and contractions of the bitter taste receptor gene repertoire in vertebrates.

Go Y; SMBE Tri-National Young Investigators.

Mol Biol Evol. 2006 May;23(5):964-72. Epub 2006 Feb 16.

PMID:
16484289
[PubMed - indexed for MEDLINE]
Free Article
4.

Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates.

Blakesley RW, Hansen NF, Gupta J, McDowell JC, Maskeri B, Barnabas BB, Brooks SY, Coleman H, Haghighi P, Ho SL, Schandler K, Stantripop S, Vogt JL, Thomas PJ; NISC Comparative Sequencing Program, Bouffard GG, Green ED.

BMC Genomics. 2010 Jan 11;11:21. doi: 10.1186/1471-2164-11-21.

PMID:
20064230
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Evolutionary changes in CpG and methylation levels in the genome of vertebrates.

Jabbari K, Cacciò S, Païs de Barros JP, Desgrès J, Bernardi G.

Gene. 1997 Dec 31;205(1-2):109-18.

PMID:
9461384
[PubMed - indexed for MEDLINE]
6.

Comparative genomics in vertebrate evolution and development.

Amemiya CT, Gomez-Chiarri M.

J Exp Zool A Comp Exp Biol. 2006 Sep 1;305(9):672-82. Review.

PMID:
16902957
[PubMed - indexed for MEDLINE]
7.

The relationship between synaptonemal complex length and genome size in four vertebrate classes (Osteicthyes, Reptilia, Aves, Mammalia).

Peterson DG, Stack SM, Healy JL, Donohoe BS, Anderson LK.

Chromosome Res. 1994 Mar;2(2):153-62.

PMID:
8032674
[PubMed - indexed for MEDLINE]
8.

Phylogenomic investigation of CR1 LINE diversity in reptiles.

Shedlock AM.

Syst Biol. 2006 Dec;55(6):902-11.

PMID:
17345672
[PubMed - indexed for MEDLINE]
9.

Comparative analyses of multi-species sequences from targeted genomic regions.

Thomas JW, Touchman JW, Blakesley RW, Bouffard GG, Beckstrom-Sternberg SM, Margulies EH, Blanchette M, Siepel AC, Thomas PJ, McDowell JC, Maskeri B, Hansen NF, Schwartz MS, Weber RJ, Kent WJ, Karolchik D, Bruen TC, Bevan R, Cutler DJ, Schwartz S, Elnitski L, Idol JR, Prasad AB, Lee-Lin SQ, Maduro VV, Summers TJ, Portnoy ME, Dietrich NL, Akhter N, Ayele K, Benjamin B, Cariaga K, Brinkley CP, Brooks SY, Granite S, Guan X, Gupta J, Haghighi P, Ho SL, Huang MC, Karlins E, Laric PL, Legaspi R, Lim MJ, Maduro QL, Masiello CA, Mastrian SD, McCloskey JC, Pearson R, Stantripop S, Tiongson EE, Tran JT, Tsurgeon C, Vogt JL, Walker MA, Wetherby KD, Wiggins LS, Young AC, Zhang LH, Osoegawa K, Zhu B, Zhao B, Shu CL, De Jong PJ, Lawrence CE, Smit AF, Chakravarti A, Haussler D, Green P, Miller W, Green ED.

Nature. 2003 Aug 14;424(6950):788-93.

PMID:
12917688
[PubMed - indexed for MEDLINE]
10.

A novel Acetyl-CoA synthetase short-chain subfamily member 1 (Acss1) gene indicates a dynamic history of paralogue retention and loss in vertebrates.

Castro LF, Lopes-Marques M, Wilson JM, Rocha E, Reis-Henriques MA, Santos MM, Cunha I.

Gene. 2012 Apr 15;497(2):249-55. doi: 10.1016/j.gene.2012.01.013. Epub 2012 Jan 31.

PMID:
22313524
[PubMed - indexed for MEDLINE]
11.

Conserved regulatory modules in the Sox9 testis-specific enhancer predict roles for SOX, TCF/LEF, Forkhead, DMRT, and GATA proteins in vertebrate sex determination.

Bagheri-Fam S, Sinclair AH, Koopman P, Harley VR.

Int J Biochem Cell Biol. 2010 Mar;42(3):472-7. doi: 10.1016/j.biocel.2009.07.001. Epub 2009 Jul 16.

PMID:
19616114
[PubMed - indexed for MEDLINE]
12.

Evolutionary growth process of highly conserved sequences in vertebrate genomes.

Ishibashi M, Noda AO, Sakate R, Imanishi T.

Gene. 2012 Aug 1;504(1):1-5. doi: 10.1016/j.gene.2012.05.003. Epub 2012 May 9.

PMID:
22580082
[PubMed - indexed for MEDLINE]
13.

Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequence in vertebrate chromosomes.

Meyne J, Baker RJ, Hobart HH, Hsu TC, Ryder OA, Ward OG, Wiley JE, Wurster-Hill DH, Yates TL, Moyzis RK.

Chromosoma. 1990 Apr;99(1):3-10.

PMID:
2340757
[PubMed - indexed for MEDLINE]
14.

[Fundamental and applied aspects of comparative genomics of vertebrates].

Makeeva NV, Pestova AA, Borodina TA, Madera DA, Ivanov DV, Stepanova EV, Baranova AV.

Genetika. 2003 Sep;39(9):1157-71. Review. Russian.

PMID:
14582384
[PubMed - indexed for MEDLINE]
15.

Comparative genomics in teleost species: Knowledge transfer by linking the genomes of model and non-model fish species.

Sarropoulou E, Fernandes JM.

Comp Biochem Physiol Part D Genomics Proteomics. 2011 Mar;6(1):92-102. doi: 10.1016/j.cbd.2010.09.003. Epub 2010 Sep 19.

PMID:
20961822
[PubMed - indexed for MEDLINE]
16.

The Vertebrate Genome Annotation (Vega) database.

Ashurst JL, Chen CK, Gilbert JG, Jekosch K, Keenan S, Meidl P, Searle SM, Stalker J, Storey R, Trevanion S, Wilming L, Hubbard T.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D459-65.

PMID:
15608237
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

[A comparative analysis of allozyme variability in vertebrate animals].

Mezhzherin SV.

Zh Obshch Biol. 1992 Jul-Aug;53(4):549-56. Russian.

PMID:
1523882
[PubMed - indexed for MEDLINE]
18.

Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates.

Kassahn KS, Dang VT, Wilkins SJ, Perkins AC, Ragan MA.

Genome Res. 2009 Aug;19(8):1404-18. doi: 10.1101/gr.086827.108. Epub 2009 May 13.

PMID:
19439512
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates.

Nakatani Y, Takeda H, Kohara Y, Morishita S.

Genome Res. 2007 Sep;17(9):1254-65. Epub 2007 Jul 25.

PMID:
17652425
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genomic regulatory blocks in vertebrates and implications in human disease.

Navratilova P, Becker TS.

Brief Funct Genomic Proteomic. 2009 Jul;8(4):333-42. doi: 10.1093/bfgp/elp019. Epub 2009 Jun 26. Review.

PMID:
19561171
[PubMed - indexed for MEDLINE]
Free Article
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