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Items: 1 to 20 of 103

1.

Cancer systems biology: a network modeling perspective.

Kreeger PK, Lauffenburger DA.

Carcinogenesis. 2010 Jan;31(1):2-8. doi: 10.1093/carcin/bgp261. Epub 2009 Oct 27. Review.

2.

Assessment of network perturbation amplitudes by applying high-throughput data to causal biological networks.

Martin F, Thomson TM, Sewer A, Drubin DA, Mathis C, Weisensee D, Pratt D, Hoeng J, Peitsch MC.

BMC Syst Biol. 2012 May 31;6:54. doi: 10.1186/1752-0509-6-54.

3.

Construction of a computable cell proliferation network focused on non-diseased lung cells.

Westra JW, Schlage WK, Frushour BP, Gebel S, Catlett NL, Han W, Eddy SF, Hengstermann A, Matthews AL, Mathis C, Lichtner RB, Poussin C, Talikka M, Veljkovic E, Van Hooser AA, Wong B, Maria MJ, Peitsch MC, Deehan R, Hoeng J.

BMC Syst Biol. 2011 Jul 2;5:105. doi: 10.1186/1752-0509-5-105.

4.

Dynamic modeling and analysis of cancer cellular network motifs.

Cloutier M, Wang E.

Integr Biol (Camb). 2011 Jul;3(7):724-32. doi: 10.1039/c0ib00145g. Epub 2011 Jun 15. Review.

PMID:
21674097
5.

Modeling metabolism: a window toward a comprehensive interpretation of networks in cancer.

Resendis-Antonio O, González-Torres C, Jaime-Muñoz G, Hernandez-Patiño CE, Salgado-Muñoz CF.

Semin Cancer Biol. 2015 Feb;30:79-87. doi: 10.1016/j.semcancer.2014.04.003. Epub 2014 Apr 18. Review.

6.

In silico models of cancer.

Edelman LB, Eddy JA, Price ND.

Wiley Interdiscip Rev Syst Biol Med. 2010 Jul-Aug;2(4):438-59. doi: 10.1002/wsbm.75. Review.

7.

Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).

Foffi G, Pastore A, Piazza F, Temussi PA.

Phys Biol. 2013 Aug 2;10(4):040301. [Epub ahead of print]

PMID:
23912807
8.

Proteomics and systems biology: current and future applications in the nutritional sciences.

Moore JB, Weeks ME.

Adv Nutr. 2011 Jul;2(4):355-64. doi: 10.3945/​an.111.000554. Epub 2011 Jun 28. Review.

9.

Proteogenomic convergence for understanding cancer pathways and networks.

Boja ES, Rodriguez H.

Clin Proteomics. 2014 Jun 1;11(1):22. doi: 10.1186/1559-0275-11-22. eCollection 2014. Review.

10.

Network dynamics in the tumor microenvironment.

Bolouri H.

Semin Cancer Biol. 2015 Feb;30:52-9. doi: 10.1016/j.semcancer.2014.02.007. Epub 2014 Feb 25. Review.

PMID:
24582766
11.

Systems biology of asthma and allergic diseases: a multiscale approach.

Bunyavanich S, Schadt EE.

J Allergy Clin Immunol. 2015 Jan;135(1):31-42. doi: 10.1016/j.jaci.2014.10.015. Epub 2014 Nov 21. Review.

12.
13.

The role of the toxicologic pathologist in the post-genomic era(#).

Maronpot RR.

J Toxicol Pathol. 2013 Jun;26(2):105-10. doi: 10.1293/tox.26.105. Epub 2013 Jul 10.

14.

Creating and analyzing pathway and protein interaction compendia for modelling signal transduction networks.

Kirouac DC, Saez-Rodriguez J, Swantek J, Burke JM, Lauffenburger DA, Sorger PK.

BMC Syst Biol. 2012 May 1;6:29. doi: 10.1186/1752-0509-6-29.

15.

Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008).

Aebersold R, Auffray C, Baney E, Barillot E, Brazma A, Brett C, Brunak S, Butte A, Califano A, Celis J, Cufer T, Ferrell J, Galas D, Gallahan D, Gatenby R, Goldbeter A, Hace N, Henney A, Hood L, Iyengar R, Jackson V, Kallioniemi O, Klingmüller U, Kolar P, Kolch W, Kyriakopoulou C, Laplace F, Lehrach H, Marcus F, Matrisian L, Nolan G, Pelkmans L, Potti A, Sander C, Seljak M, Singer D, Sorger P, Stunnenberg H, Superti-Furga G, Uhlen M, Vidal M, Weinstein J, Wigle D, Williams M, Wolkenhauer O, Zhivotovsky B, Zinovyev A, Zupan B.

Mol Oncol. 2009 Feb;3(1):9-17. doi: 10.1016/j.molonc.2008.11.003. Epub 2008 Dec 9.

16.

Analysis of cancer signaling networks by systems biology to develop therapies.

Prasasya RD, Tian D, Kreeger PK.

Semin Cancer Biol. 2011 Jun;21(3):200-6. doi: 10.1016/j.semcancer.2011.04.001. Epub 2011 Apr 9. Review.

PMID:
21511035
17.

Metabolic network modeling approaches for investigating the "hungry cancer".

Sharma AK, König R.

Semin Cancer Biol. 2013 Aug;23(4):227-34. doi: 10.1016/j.semcancer.2013.05.001. Epub 2013 May 13. Review.

PMID:
23680724
18.

Cancer systems biology in the genome sequencing era: part 1, dissecting and modeling of tumor clones and their networks.

Wang E, Zou J, Zaman N, Beitel LK, Trifiro M, Paliouras M.

Semin Cancer Biol. 2013 Aug;23(4):279-85. doi: 10.1016/j.semcancer.2013.06.002. Epub 2013 Jun 19. Review.

PMID:
23791722
19.

[Systems biology of cancer].

Barillot E, Calzone L, Zinovyev A.

Med Sci (Paris). 2009 Jun-Jul;25(6-7):601-7. doi: 10.1051/medsci/2009256-7601. French.

20.

miRNA and cancer; computational and experimental approaches.

Tutar Y.

Curr Pharm Biotechnol. 2014;15(5):429.

PMID:
25189575
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