Format
Sort by

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 143

1.

Germ warfare in a microbial mat community: CRISPRs provide insights into the co-evolution of host and viral genomes.

Heidelberg JF, Nelson WC, Schoenfeld T, Bhaya D.

PLoS One. 2009;4(1):e4169. doi: 10.1371/journal.pone.0004169. Epub 2009 Jan 9.

2.

Diverse CRISPRs evolving in human microbiomes.

Rho M, Wu YW, Tang H, Doak TG, Ye Y.

PLoS Genet. 2012;8(6):e1002441. doi: 10.1371/journal.pgen.1002441. Epub 2012 Jun 13.

3.

Virus population dynamics and acquired virus resistance in natural microbial communities.

Andersson AF, Banfield JF.

Science. 2008 May 23;320(5879):1047-50. doi: 10.1126/science.1157358.

4.

Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus.

Horvath P, Romero DA, Coûté-Monvoisin AC, Richards M, Deveau H, Moineau S, Boyaval P, Fremaux C, Barrangou R.

J Bacteriol. 2008 Feb;190(4):1401-12. Epub 2007 Dec 7.

5.

Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses.

Bhaya D, Grossman AR, Steunou AS, Khuri N, Cohan FM, Hamamura N, Melendrez MC, Bateson MM, Ward DM, Heidelberg JF.

ISME J. 2007 Dec;1(8):703-13. Epub 2007 Oct 25.

PMID:
18059494
6.

[Comparative analysis of clustered regularly interspaced short palindromic repeats (CRISPRs) loci in the genomes of halophilic archaea].

Zhang F, Zhang B, Xiang H, Hu S.

Wei Sheng Wu Xue Bao. 2009 Nov;49(11):1445-53. Chinese.

PMID:
20112671
7.

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes.

Haft DH, Selengut J, Mongodin EF, Nelson KE.

PLoS Comput Biol. 2005 Nov;1(6):e60. Epub 2005 Nov 11.

8.

CRISPR/Cas, the immune system of bacteria and archaea.

Horvath P, Barrangou R.

Science. 2010 Jan 8;327(5962):167-70. doi: 10.1126/science.1179555. Review.

PMID:
20056882
9.

Metagenomic analyses of novel viruses and plasmids from a cultured environmental sample of hyperthermophilic neutrophiles.

Garrett RA, Prangishvili D, Shah SA, Reuter M, Stetter KO, Peng X.

Environ Microbiol. 2010 Nov;12(11):2918-30. doi: 10.1111/j.1462-2920.2010.02266.x.

PMID:
20545752
10.

Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems.

Burstein D, Sun CL, Brown CT, Sharon I, Anantharaman K, Probst AJ, Thomas BC, Banfield JF.

Nat Commun. 2016 Feb 3;7:10613. doi: 10.1038/ncomms10613.

11.

Snapshot of haloarchaeal tailed virus genomes.

Senčilo A, Jacobs-Sera D, Russell DA, Ko CC, Bowman CA, Atanasova NS, Österlund E, Oksanen HM, Bamford DH, Hatfull GF, Roine E, Hendrix RW.

RNA Biol. 2013 May;10(5):803-16. doi: 10.4161/rna.24045. Epub 2013 Mar 7.

12.

Clustered regularly interspaced short palindromic repeats (CRISPRs): the hallmark of an ingenious antiviral defense mechanism in prokaryotes.

Al-Attar S, Westra ER, van der Oost J, Brouns SJ.

Biol Chem. 2011 Apr;392(4):277-89. doi: 10.1515/BC.2011.042. Epub 2011 Feb 7. Review.

PMID:
21294681
13.
14.

Genome signature analysis of thermal virus metagenomes reveals Archaea and thermophilic signatures.

Pride DT, Schoenfeld T.

BMC Genomics. 2008 Sep 17;9:420. doi: 10.1186/1471-2164-9-420.

15.

CRISPR loci reveal networks of gene exchange in archaea.

Brodt A, Lurie-Weinberger MN, Gophna U.

Biol Direct. 2011 Dec 21;6(1):65. doi: 10.1186/1745-6150-6-65.

16.

CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaea.

Sorek R, Kunin V, Hugenholtz P.

Nat Rev Microbiol. 2008 Mar;6(3):181-6. Review.

PMID:
18157154
17.

Comparative genomic analysis of phylogenetically closely related Hydrogenobaculum sp. isolates from Yellowstone National Park.

Romano C, D'Imperio S, Woyke T, Mavromatis K, Lasken R, Shock EL, McDermott TR.

Appl Environ Microbiol. 2013 May;79(9):2932-43. doi: 10.1128/AEM.03591-12. Epub 2013 Feb 22.

18.

Comparative analysis of CRISPR cassettes from the human gut metagenomic contigs.

Gogleva AA, Gelfand MS, Artamonova II.

BMC Genomics. 2014 Mar 17;15:202. doi: 10.1186/1471-2164-15-202.

19.

Comparative analysis of CRISPR loci in lactic acid bacteria genomes.

Horvath P, Coûté-Monvoisin AC, Romero DA, Boyaval P, Fremaux C, Barrangou R.

Int J Food Microbiol. 2009 Apr 30;131(1):62-70. doi: 10.1016/j.ijfoodmicro.2008.05.030. Epub 2008 Jul 16.

PMID:
18635282
20.

Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses.

Tyson GW, Banfield JF.

Environ Microbiol. 2008 Jan;10(1):200-7. Epub 2007 Sep 24.

PMID:
17894817
Items per page

Supplemental Content

Write to the Help Desk