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Items: 1 to 20 of 94

1.

Single-RNA counting reveals alternative modes of gene expression in yeast.

Zenklusen D, Larson DR, Singer RH.

Nat Struct Mol Biol. 2008 Dec;15(12):1263-71. doi: 10.1038/nsmb.1514. Epub 2008 Nov 16.

2.

Visualization and analysis of mRNA molecules using fluorescence in situ hybridization in Saccharomyces cerevisiae.

McIsaac RS, Silverman SJ, Parsons L, Xu P, Briehof R, McClean MN, Botstein D.

J Vis Exp. 2013 Jun 14;(76):e50382. doi: 10.3791/50382.

3.

SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope.

Cabal GG, Genovesio A, Rodriguez-Navarro S, Zimmer C, Gadal O, Lesne A, Buc H, Feuerbach-Fournier F, Olivo-Marin JC, Hurt EC, Nehrbass U.

Nature. 2006 Jun 8;441(7094):770-3.

PMID:
16760982
4.
5.

Extensive transcriptional heterogeneity revealed by isoform profiling.

Pelechano V, Wei W, Steinmetz LM.

Nature. 2013 May 2;497(7447):127-31. doi: 10.1038/nature12121. Epub 2013 Apr 24.

6.

Genetic dissection of transcriptional regulation in budding yeast.

Brem RB, Yvert G, Clinton R, Kruglyak L.

Science. 2002 Apr 26;296(5568):752-5. Epub 2002 Mar 28.

7.

Transcriptional elements involved in the repression of ribosomal protein synthesis.

Li B, Nierras CR, Warner JR.

Mol Cell Biol. 1999 Aug;19(8):5393-404.

8.

Transcription of functionally related constitutive genes is not coordinated.

Gandhi SJ, Zenklusen D, Lionnet T, Singer RH.

Nat Struct Mol Biol. 2011 Jan;18(1):27-34. doi: 10.1038/nsmb.1934. Epub 2010 Dec 5.

9.

Measurement and modeling of transcriptional noise in the cell cycle regulatory network.

Ball DA, Adames NR, Reischmann N, Barik D, Franck CT, Tyson JJ, Peccoud J.

Cell Cycle. 2013 Oct 1;12(19):3203-18. doi: 10.4161/cc.26257. Epub 2013 Sep 4.

10.

Characterization of the yeast transcriptome.

Velculescu VE, Zhang L, Zhou W, Vogelstein J, Basrai MA, Bassett DE Jr, Hieter P, Vogelstein B, Kinzler KW.

Cell. 1997 Jan 24;88(2):243-51.

11.

Activation of a poised RNAPII-dependent promoter requires both SAGA and mediator.

Lee SK, Fletcher AG, Zhang L, Chen X, Fischbeck JA, Stargell LA.

Genetics. 2010 Mar;184(3):659-72. doi: 10.1534/genetics.109.113464. Epub 2010 Jan 4.

12.

Selective requirement for SAGA in Hog1-mediated gene expression depending on the severity of the external osmostress conditions.

Zapater M, Sohrmann M, Peter M, Posas F, de Nadal E.

Mol Cell Biol. 2007 Jun;27(11):3900-10. Epub 2007 Apr 2.

13.

Single-molecule analysis of gene expression using two-color RNA labeling in live yeast.

Hocine S, Raymond P, Zenklusen D, Chao JA, Singer RH.

Nat Methods. 2013 Feb;10(2):119-21. doi: 10.1038/nmeth.2305. Epub 2012 Dec 23.

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16.

Paf1p, an RNA polymerase II-associated factor in Saccharomyces cerevisiae, may have both positive and negative roles in transcription.

Shi X, Finkelstein A, Wolf AJ, Wade PA, Burton ZF, Jaehning JA.

Mol Cell Biol. 1996 Feb;16(2):669-76.

17.

Genome wide expression analysis of the CCR4-NOT complex indicates that it consists of three modules with the NOT module controlling SAGA-responsive genes.

Cui Y, Ramnarain DB, Chiang YC, Ding LH, McMahon JS, Denis CL.

Mol Genet Genomics. 2008 Apr;279(4):323-37. doi: 10.1007/s00438-007-0314-1. Epub 2008 Jan 23.

PMID:
18214544
18.

The yeast Mediator complex and its regulation.

Björklund S, Gustafsson CM.

Trends Biochem Sci. 2005 May;30(5):240-4. Review.

PMID:
15896741
19.
20.

Distinct role of Mediator tail module in regulation of SAGA-dependent, TATA-containing genes in yeast.

Ansari SA, Ganapathi M, Benschop JJ, Holstege FC, Wade JT, Morse RH.

EMBO J. 2012 Jan 4;31(1):44-57. doi: 10.1038/emboj.2011.362. Epub 2011 Oct 4.

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