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Results: 1 to 20 of 298

1.

Riboswitches in eubacteria sense the second messenger cyclic di-GMP.

Sudarsan N, Lee ER, Weinberg Z, Moy RH, Kim JN, Link KH, Breaker RR.

Science. 2008 Jul 18;321(5887):411-3. doi: 10.1126/science.1159519.

PMID:
18635805
[PubMed - indexed for MEDLINE]
Free Article
2.

Structural basis of differential ligand recognition by two classes of bis-(3'-5')-cyclic dimeric guanosine monophosphate-binding riboswitches.

Smith KD, Shanahan CA, Moore EL, Simon AC, Strobel SA.

Proc Natl Acad Sci U S A. 2011 May 10;108(19):7757-62. doi: 10.1073/pnas.1018857108. Epub 2011 Apr 25.

PMID:
21518891
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Differential analogue binding by two classes of c-di-GMP riboswitches.

Shanahan CA, Gaffney BL, Jones RA, Strobel SA.

J Am Chem Soc. 2011 Oct 5;133(39):15578-92. doi: 10.1021/ja204650q. Epub 2011 Sep 8.

PMID:
21838307
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch.

Kulshina N, Baird NJ, Ferré-D'Amaré AR.

Nat Struct Mol Biol. 2009 Dec;16(12):1212-7. doi: 10.1038/nsmb.1701. Epub 2009 Nov 8.

PMID:
19898478
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

An allosteric self-splicing ribozyme triggered by a bacterial second messenger.

Lee ER, Baker JL, Weinberg Z, Sudarsan N, Breaker RR.

Science. 2010 Aug 13;329(5993):845-8. doi: 10.1126/science.1190713.

PMID:
20705859
[PubMed - indexed for MEDLINE]
Free Article
6.

Structural basis of ligand binding by a c-di-GMP riboswitch.

Smith KD, Lipchock SV, Ames TD, Wang J, Breaker RR, Strobel SA.

Nat Struct Mol Biol. 2009 Dec;16(12):1218-23. doi: 10.1038/nsmb.1702. Epub 2009 Nov 8.

PMID:
19898477
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The bacterial second messenger c-di-GMP: probing interactions with protein and RNA binding partners using cyclic dinucleotide analogs.

Shanahan CA, Strobel SA.

Org Biomol Chem. 2012 Dec 14;10(46):9113-29. doi: 10.1039/c2ob26724a. Epub 2012 Oct 29. Review.

PMID:
23108253
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT.

Waters CM, Lu W, Rabinowitz JD, Bassler BL.

J Bacteriol. 2008 Apr;190(7):2527-36. doi: 10.1128/JB.01756-07. Epub 2008 Jan 25.

PMID:
18223081
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.

Smith KD, Lipchock SV, Strobel SA.

Biochemistry. 2012 Jan 10;51(1):425-32. doi: 10.1021/bi2016662. Epub 2011 Dec 27.

PMID:
22148472
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Selective binding of 2'-F-c-di-GMP to Ct-E88 and Cb-E43, new class I riboswitches from Clostridium tetani and Clostridium botulinum respectively.

Luo Y, Zhou J, Wang J, Dayie TK, Sintim HO.

Mol Biosyst. 2013 Jun;9(6):1535-9. doi: 10.1039/c3mb25560c. Epub 2013 Apr 5.

PMID:
23559271
[PubMed - indexed for MEDLINE]
11.

Identification of ligand analogues that control c-di-GMP riboswitches.

Furukawa K, Gu H, Sudarsan N, Hayakawa Y, Hyodo M, Breaker RR.

ACS Chem Biol. 2012 Aug 17;7(8):1436-43. doi: 10.1021/cb300138n. Epub 2012 Jun 19.

PMID:
22646696
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Cyclic-di-GMP reaches out into the bacterial RNA world.

Hengge R.

Sci Signal. 2010 Nov 23;3(149):pe44. doi: 10.1126/scisignal.3149pe44.

PMID:
21098727
[PubMed - indexed for MEDLINE]
13.

Functional roles of a tetraloop/receptor interacting module in a cyclic di-GMP riboswitch.

Fujita Y, Tanaka T, Furuta H, Ikawa Y.

J Biosci Bioeng. 2012 Feb;113(2):141-5. doi: 10.1016/j.jbiosc.2011.10.004. Epub 2011 Nov 9.

PMID:
22074990
[PubMed - indexed for MEDLINE]
14.

Differential binding of 2'-biotinylated analogs of c-di-GMP with c-di-GMP riboswitches and binding proteins.

Luo Y, Zhou J, Watt SK, Lee VT, Dayie TK, Sintim HO.

Mol Biosyst. 2012 Mar;8(3):772-8. doi: 10.1039/c2mb05338a. Epub 2011 Dec 19.

PMID:
22182995
[PubMed - indexed for MEDLINE]
15.

You've come a long way: c-di-GMP signaling.

Sondermann H, Shikuma NJ, Yildiz FH.

Curr Opin Microbiol. 2012 Apr;15(2):140-6. doi: 10.1016/j.mib.2011.12.008. Epub 2012 Jan 5. Review.

PMID:
22226607
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

When the PilZ don't work: effectors for cyclic di-GMP action in bacteria.

Ryan RP, Tolker-Nielsen T, Dow JM.

Trends Microbiol. 2012 May;20(5):235-42. doi: 10.1016/j.tim.2012.02.008. Epub 2012 Mar 21. Review.

PMID:
22444828
[PubMed - indexed for MEDLINE]
17.

Allosteric tertiary interactions preorganize the c-di-GMP riboswitch and accelerate ligand binding.

Wood S, Ferré-D'Amaré AR, Rueda D.

ACS Chem Biol. 2012 May 18;7(5):920-7. doi: 10.1021/cb300014u. Epub 2012 Mar 13.

PMID:
22380737
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Interactions of the c-di-GMP riboswitch with its second messenger ligand.

Smith KD, Strobel SA.

Biochem Soc Trans. 2011 Apr;39(2):647-51. doi: 10.1042/BST0390647. Review.

PMID:
21428955
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

C-di-GMP: the dawning of a novel bacterial signalling system.

Römling U, Gomelsky M, Galperin MY.

Mol Microbiol. 2005 Aug;57(3):629-39. Review.

PMID:
16045609
[PubMed - indexed for MEDLINE]
20.

Cyclic di-GMP: the first 25 years of a universal bacterial second messenger.

Römling U, Galperin MY, Gomelsky M.

Microbiol Mol Biol Rev. 2013 Mar;77(1):1-52. doi: 10.1128/MMBR.00043-12. Review.

PMID:
23471616
[PubMed - indexed for MEDLINE]
Free PMC Article

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