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Similar articles for PubMed (Select 18549499)

1.

Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories.

Boedigheimer MJ, Wolfinger RD, Bass MB, Bushel PR, Chou JW, Cooper M, Corton JC, Fostel J, Hester S, Lee JS, Liu F, Liu J, Qian HR, Quackenbush J, Pettit S, Thompson KL.

BMC Genomics. 2008 Jun 12;9:285. doi: 10.1186/1471-2164-9-285.

2.

Overview of an interlaboratory collaboration on evaluating the effects of model hepatotoxicants on hepatic gene expression.

Ulrich RG, Rockett JC, Gibson GG, Pettit SD.

Environ Health Perspect. 2004 Mar;112(4):423-7.

3.

Optimization of an animal test protocol for toxicogenomics studies (ii); a cross-laboratory gene expression analysis.

Sumida K, Saito K, Oeda K, Otsuka M, Tsujimura K, Miyaura H, Sekijima M, Nakayama K, Kawano Y, Kawakami Y, Asamoto M, Shirai T.

J Toxicol Sci. 2007 Feb;32(1):33-45.

4.

Systems toxicology used in nanotoxicology: mechanistic insights into the hepatotoxicity of nano-copper particles from toxicogenomics.

Yang B, Wang Q, Lei R, Wu C, Shi C, Wang Q, Yuan Y, Wang Y, Luo Y, Hu Z, Ma H, Liao M.

J Nanosci Nanotechnol. 2010 Dec;10(12):8527-37.

PMID:
21121362
5.

Clofibrate-induced gene expression changes in rat liver: a cross-laboratory analysis using membrane cDNA arrays.

Baker VA, Harries HM, Waring JF, Duggan CM, Ni HA, Jolly RA, Yoon LW, De Souza AT, Schmid JE, Brown RH, Ulrich RG, Rockett JC.

Environ Health Perspect. 2004 Mar;112(4):428-38.

6.

Variation in the hepatic gene expression in individual male Fischer rats.

Boorman GA, Irwin RD, Vallant MK, Gerken DK, Lobenhofer EK, Hejtmancik MR, Hurban P, Brys AM, Travlos GS, Parker JS, Portier CJ.

Toxicol Pathol. 2005;33(1):102-10.

7.

In pursuit of effective toxicogenomics.

Gant TW, Zhang SD.

Mutat Res. 2005 Aug 4;575(1-2):4-16. Review.

PMID:
15885710
8.

Pooling samples within microarray studies: a comparative analysis of rat liver transcription response to prototypical toxicants.

Jolly RA, Goldstein KM, Wei T, Gao H, Chen P, Huang S, Colet JM, Ryan TP, Thomas CE, Estrem ST.

Physiol Genomics. 2005 Aug 11;22(3):346-55. Epub 2005 May 24.

9.

Cross-site comparison of gene expression data reveals high similarity.

Chu TM, Deng S, Wolfinger R, Paules RS, Hamadeh HK.

Environ Health Perspect. 2004 Mar;112(4):449-55.

10.

Utilization of a one-dimensional score for surveying chemical-induced changes in expression levels of multiple biomarker gene sets using a large-scale toxicogenomics database.

Kiyosawa N, Shiwaku K, Hirode M, Omura K, Uehara T, Shimizu T, Mizukawa Y, Miyagishima T, Ono A, Nagao T, Urushidani T.

J Toxicol Sci. 2006 Dec;31(5):433-48.

11.

Sources of variance in baseline gene expression in the rodent liver.

Corton JC, Bushel PR, Fostel J, O'Lone RB.

Mutat Res. 2012 Aug 15;746(2):104-12. doi: 10.1016/j.mrgentox.2011.12.017. Epub 2012 Jan 5. Review.

12.

Toxicogenomics in the assessment of immunotoxicity.

Baken KA, Vandebriel RJ, Pennings JL, Kleinjans JC, van Loveren H.

Methods. 2007 Jan;41(1):132-41. Review.

PMID:
17161310
13.

Application of microarray-based analysis of gene expression in the field of toxicogenomics.

Mei N, Fuscoe JC, Lobenhofer EK, Guo L.

Methods Mol Biol. 2010;597:227-41. doi: 10.1007/978-1-60327-389-3_16.

PMID:
20013237
14.

Background gene expression in rat kidney: influence of strain, gender, and diet.

Seidel SD, Hung SC, Lynn Kan H, Bhaskar Gollapudi B.

Toxicol Sci. 2006 Nov;94(1):226-33. Epub 2006 Aug 17.

15.

Optimizing microarray in experimental hypertension.

Shannon MF, McKenzie KU, Edgley A, Rao S, Peng K, Shweta A, Schyvens CG, Anderson WP, Wilson SR, Pittelkow YE, Ohms S, Whitworth JA.

Kidney Int. 2005 Jan;67(1):364-70.

PMID:
15610263
16.

Gene expression analysis reveals chemical-specific profiles.

Hamadeh HK, Bushel PR, Jayadev S, Martin K, DiSorbo O, Sieber S, Bennett L, Tennant R, Stoll R, Barrett JC, Blanchard K, Paules RS, Afshari CA.

Toxicol Sci. 2002 Jun;67(2):219-31.

17.

Scoring multiple toxicological endpoints using a toxicogenomic database.

Kiyosawa N, Ando Y, Watanabe K, Niino N, Manabe S, Yamoto T.

Toxicol Lett. 2009 Jul 24;188(2):91-7. doi: 10.1016/j.toxlet.2009.03.011. Epub 2009 Mar 24.

PMID:
19446240
18.

Database development in toxicogenomics: issues and efforts.

Mattes WB, Pettit SD, Sansone SA, Bushel PR, Waters MD.

Environ Health Perspect. 2004 Mar;112(4):495-505. Review.

19.

Gene expression and isoform variation analysis using Affymetrix Exon Arrays.

Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.

BMC Genomics. 2008 Nov 7;9:529. doi: 10.1186/1471-2164-9-529. Erratum in: BMC Genomics. 2009 Mar 23;10. doi: 10.1186/1471-2164-10-121.

20.

Interlaboratory evaluation of rat hepatic gene expression changes induced by methapyrilene.

Waring JF, Ulrich RG, Flint N, Morfitt D, Kalkuhl A, Staedtler F, Lawton M, Beekman JM, Suter L.

Environ Health Perspect. 2004 Mar;112(4):439-48.

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