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Results: 1 to 20 of 120

1.

Identification of ancient remains through genomic sequencing.

Blow MJ, Zhang T, Woyke T, Speller CF, Krivoshapkin A, Yang DY, Derevianko A, Rubin EM.

Genome Res. 2008 Aug;18(8):1347-53. doi: 10.1101/gr.076091.108. Epub 2008 Apr 21. Erratum in: Genome Res. 2008 Nov;18(11):1859.

PMID:
18426903
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Preparing a re-sequencing DNA library of 2 cancer candidate genes using the ligation-by-amplification protocol by two PCR reactions.

Su Y, Lin L, Tian G, Chen C, Liu T, Xu X, Qi X, Zhang X, Yang H.

Sci China C Life Sci. 2009 May;52(5):483-91. doi: 10.1007/s11427-009-0066-8. Epub 2009 May 27.

PMID:
19471873
[PubMed - indexed for MEDLINE]
3.

Direct multiplex sequencing (DMPS)--a novel method for targeted high-throughput sequencing of ancient and highly degraded DNA.

Stiller M, Knapp M, Stenzel U, Hofreiter M, Meyer M.

Genome Res. 2009 Oct;19(10):1843-8. doi: 10.1101/gr.095760.109. Epub 2009 Jul 27.

PMID:
19635845
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing.

Meyer M, Briggs AW, Maricic T, Höber B, Höffner B, Krause J, Weihmann A, Pääbo S, Hofreiter M.

Nucleic Acids Res. 2008 Jan;36(1):e5. Epub 2007 Dec 15.

PMID:
18084031
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Ancient mitogenomics.

Ho SY, Gilbert MT.

Mitochondrion. 2010 Jan;10(1):1-11. doi: 10.1016/j.mito.2009.09.005. Epub 2009 Sep 27. Review.

PMID:
19788938
[PubMed - indexed for MEDLINE]
6.

Digital PCR provides sensitive and absolute calibration for high throughput sequencing.

White RA 3rd, Blainey PC, Fan HC, Quake SR.

BMC Genomics. 2009 Mar 19;10:116. doi: 10.1186/1471-2164-10-116. Erratum in: BMC Genomics. 2009;10:541.

PMID:
19298667
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA.

Boessenkool S, Epp LS, Haile J, Bellemain E, Edwards M, Coissac E, Willerslev E, Brochmann C.

Mol Ecol. 2012 Apr;21(8):1806-15. doi: 10.1111/j.1365-294X.2011.05306.x. Epub 2011 Oct 12.

PMID:
21988749
[PubMed - indexed for MEDLINE]
8.

Case study: enrichment of ancient mitochondrial DNA by hybridization capture.

Horn S.

Methods Mol Biol. 2012;840:189-95. doi: 10.1007/978-1-61779-516-9_22.

PMID:
22237536
[PubMed - indexed for MEDLINE]
9.

Improving the performance of true single molecule sequencing for ancient DNA.

Ginolhac A, Vilstrup J, Stenderup J, Rasmussen M, Stiller M, Shapiro B, Zazula G, Froese D, Steinmann KE, Thompson JF, Al-Rasheid KA, Gilbert TM, Willerslev E, Orlando L.

BMC Genomics. 2012 May 10;13:177. doi: 10.1186/1471-2164-13-177.

PMID:
22574620
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

2000 Year-old ancient equids: an ancient-DNA lesson from pompeii remains.

Di Bernardo G, Del Gaudio S, Galderisi U, Cipollaro M.

J Exp Zool B Mol Dev Evol. 2004 Nov 15;302(6):550-6.

PMID:
15468050
[PubMed - indexed for MEDLINE]
11.

Ancient DNA sequences reveal unsuspected phylogenetic relationships within New Zealand wrens (Acanthisittidae).

Cooper A.

Experientia. 1994 Jun 15;50(6):558-63.

PMID:
8020616
[PubMed - indexed for MEDLINE]
12.

Improving ancient DNA read mapping against modern reference genomes.

Schubert M, Ginolhac A, Lindgreen S, Thompson JF, Al-Rasheid KA, Willerslev E, Krogh A, Orlando L.

BMC Genomics. 2012 May 10;13:178. doi: 10.1186/1471-2164-13-178.

PMID:
22574660
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

A complete mitochondrial genome sequence from a mesolithic wild aurochs (Bos primigenius).

Edwards CJ, Magee DA, Park SD, McGettigan PA, Lohan AJ, Murphy A, Finlay EK, Shapiro B, Chamberlain AT, Richards MB, Bradley DG, Loftus BJ, MacHugh DE.

PLoS One. 2010 Feb 17;5(2):e9255. doi: 10.1371/journal.pone.0009255.

PMID:
20174668
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Assessing the fidelity of ancient DNA sequences amplified from nuclear genes.

Binladen J, Wiuf C, Gilbert MT, Bunce M, Barnett R, Larson G, Greenwood AD, Haile J, Ho SY, Hansen AJ, Willerslev E.

Genetics. 2006 Feb;172(2):733-41. Epub 2005 Nov 19.

PMID:
16299392
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing.

Binladen J, Gilbert MT, Bollback JP, Panitz F, Bendixen C, Nielsen R, Willerslev E.

PLoS One. 2007 Feb 14;2(2):e197.

PMID:
17299583
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Very old DNA.

DeSalle R, Grimaldi D.

Curr Opin Genet Dev. 1994 Dec;4(6):810-5. Review.

PMID:
7888749
[PubMed - indexed for MEDLINE]
17.

Proboscidean DNA from museum and fossil specimens: an assessment of ancient DNA extraction and amplification techniques.

Yang H, Golenberg EM, Shoshani J.

Biochem Genet. 1997 Jun;35(5-6):165-79.

PMID:
9332711
[PubMed - indexed for MEDLINE]
18.

Fragmentation of contaminant and endogenous DNA in ancient samples determined by shotgun sequencing; prospects for human palaeogenomics.

García-Garcerà M, Gigli E, Sanchez-Quinto F, Ramirez O, Calafell F, Civit S, Lalueza-Fox C.

PLoS One. 2011;6(8):e24161. doi: 10.1371/journal.pone.0024161. Epub 2011 Aug 31.

PMID:
21904610
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Analysis of high-throughput ancient DNA sequencing data.

Kircher M.

Methods Mol Biol. 2012;840:197-228. doi: 10.1007/978-1-61779-516-9_23.

PMID:
22237537
[PubMed - indexed for MEDLINE]
20.

Ancient DNA from Polynesian rats: extraction, amplification and sequence from single small bones.

Matisoo-Smith E, Allen JS, Ladefoged TN, Roberts RM, Lambert DM.

Electrophoresis. 1997 Aug;18(9):1534-7.

PMID:
9378117
[PubMed - indexed for MEDLINE]
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