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Results: 1 to 20 of 583

1.

Whole-gene positive selection, elevated synonymous substitution rates, duplication, and indel evolution of the chloroplast clpP1 gene.

Erixon P, Oxelman B.

PLoS One. 2008 Jan 2;3(1):e1386. doi: 10.1371/journal.pone.0001386.

PMID:
18167545
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Molecular evolution of nuclear genes in Cupressacea, a group of conifer trees.

Kusumi J, Tsumura Y, Yoshimaru H, Tachida H.

Mol Biol Evol. 2002 May;19(5):736-47.

PMID:
11961107
[PubMed - indexed for MEDLINE]
Free Article
3.

The evolutionary implications of knox-I gene duplications in conifers: correlated evidence from phylogeny, gene mapping, and analysis of functional divergence.

Guillet-Claude C, Isabel N, Pelgas B, Bousquet J.

Mol Biol Evol. 2004 Dec;21(12):2232-45. Epub 2004 Aug 18.

PMID:
15317878
[PubMed - indexed for MEDLINE]
Free Article
4.

Duplication and adaptive evolution of the COR15 genes within the highly cold-tolerant Draba lineage (Brassicaceae).

Zhou D, Zhou J, Meng L, Wang Q, Xie H, Guan Y, Ma Z, Zhong Y, Chen F, Liu J.

Gene. 2009 Jul 15;441(1-2):36-44. doi: 10.1016/j.gene.2008.06.024. Epub 2008 Jun 27.

PMID:
18640249
[PubMed - indexed for MEDLINE]
5.

Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae.

Parkinson CL, Mower JP, Qiu YL, Shirk AJ, Song K, Young ND, DePamphilis CW, Palmer JD.

BMC Evol Biol. 2005 Dec 20;5:73.

PMID:
16368004
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Extensive purifying selection acting on synonymous sites in HIV-1 Group M sequences.

Ngandu NK, Scheffler K, Moore P, Woodman Z, Martin D, Seoighe C.

Virol J. 2008 Dec 23;5:160. doi: 10.1186/1743-422X-5-160. Review.

PMID:
19105834
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Molecular evolution of PISTILLATA-like genes in the dogwood genus Cornus (Cornaceae).

Zhang W, Xiang QY, Thomas DT, Wiegmann BM, Frohlich MW, Soltis DE.

Mol Phylogenet Evol. 2008 Apr;47(1):175-95. doi: 10.1016/j.ympev.2007.12.022. Epub 2008 Jan 1.

PMID:
18304837
[PubMed - indexed for MEDLINE]
8.

Unique genes in plants: specificities and conserved features throughout evolution.

Armisén D, Lecharny A, Aubourg S.

BMC Evol Biol. 2008 Oct 10;8:280. doi: 10.1186/1471-2148-8-280.

PMID:
18847470
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL.

Gaut BS, Morton BR, McCaig BC, Clegg MT.

Proc Natl Acad Sci U S A. 1996 Sep 17;93(19):10274-9.

PMID:
8816790
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Evaluation of whether accelerated protein evolution in chordates has occurred before, after, or simultaneously with gene duplication.

Johnston CR, O'Dushlaine C, Fitzpatrick DA, Edwards RJ, Shields DC.

Mol Biol Evol. 2007 Jan;24(1):315-23. Epub 2006 Oct 25.

PMID:
17065596
[PubMed - indexed for MEDLINE]
Free Article
11.

Molecular evolution of the teosinte branched gene among maize and related grasses.

Lukens L, Doebley J.

Mol Biol Evol. 2001 Apr;18(4):627-38.

PMID:
11264415
[PubMed - indexed for MEDLINE]
Free Article
12.

Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages.

Yang Z, Nielsen R.

Mol Biol Evol. 2002 Jun;19(6):908-17.

PMID:
12032247
[PubMed - indexed for MEDLINE]
Free Article
13.

Evolutionary history of the UCP gene family: gene duplication and selection.

Hughes J, Criscuolo F.

BMC Evol Biol. 2008 Nov 3;8:306. doi: 10.1186/1471-2148-8-306.

PMID:
18980678
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Evolution of the mitochondrial rps3 intron in perennial and annual angiosperms and homology to nad5 intron 1.

Laroche J, Bousquet J.

Mol Biol Evol. 1999 Apr;16(4):441-52.

PMID:
10331271
[PubMed - indexed for MEDLINE]
Free Article
15.

Divergence of the Dof gene families in poplar, Arabidopsis, and rice suggests multiple modes of gene evolution after duplication.

Yang X, Tuskan GA, Cheng MZ.

Plant Physiol. 2006 Nov;142(3):820-30. Epub 2006 Sep 15.

PMID:
16980566
[PubMed - indexed for MEDLINE]
Free PMC Article
16.
17.

Patterns of nucleotide substitution among simultaneously duplicated gene pairs in Arabidopsis thaliana.

Zhang L, Vision TJ, Gaut BS.

Mol Biol Evol. 2002 Sep;19(9):1464-73.

PMID:
12200474
[PubMed - indexed for MEDLINE]
Free Article
18.

Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants.

Drouin G, Daoud H, Xia J.

Mol Phylogenet Evol. 2008 Dec;49(3):827-31. doi: 10.1016/j.ympev.2008.09.009. Epub 2008 Sep 21.

PMID:
18838124
[PubMed - indexed for MEDLINE]
19.

Molecular evolution of cytochrome c oxidase subunit IV: evidence for positive selection in simian primates.

Wu W, Goodman M, Lomax MI, Grossman LI.

J Mol Evol. 1997 May;44(5):477-91.

PMID:
9115172
[PubMed - indexed for MEDLINE]
20.

The roles of positive and negative selection in the molecular evolution of insect endosymbionts.

Fry AJ, Wernegreen JJ.

Gene. 2005 Aug 1;355:1-10.

PMID:
16039807
[PubMed - indexed for MEDLINE]

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