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Results: 1 to 20 of 99

1.

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing.

Hafner M, Landgraf P, Ludwig J, Rice A, Ojo T, Lin C, Holoch D, Lim C, Tuschl T.

Methods. 2008 Jan;44(1):3-12. Review.

PMID:
18158127
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Characterization of microRNAs from goat (Capra hircus) by Solexa deep-sequencing technology.

Ling YH, Ding JP, Zhang XD, Wang LJ, Zhang YH, Li YS, Zhang ZJ, Zhang XR.

Genet Mol Res. 2013 Jun 13;12(2):1951-61. doi: 10.4238/2013.June.13.4.

PMID:
23913378
[PubMed - indexed for MEDLINE]
Free Article
3.

Generation of plant small RNA cDNA libraries for high-throughput sequencing.

Zhu QH, Helliwell CA.

Methods Mol Biol. 2012;894:123-37. doi: 10.1007/978-1-61779-882-5_9.

PMID:
22678577
[PubMed - indexed for MEDLINE]
4.

Construction of small RNA cDNA libraries for deep sequencing.

Lu C, Meyers BC, Green PJ.

Methods. 2007 Oct;43(2):110-7.

PMID:
17889797
[PubMed - indexed for MEDLINE]
5.

Unique small RNA signatures uncovered in the tammar wallaby genome.

Lindsay J, Carone DM, Brown J, Hall L, Qureshi S, Mitchell SE, Jannetty N, Hannon G, Renfree M, Pask A, O'Neill M, O'Neill R.

BMC Genomics. 2012 Oct 17;13:559. doi: 10.1186/1471-2164-13-559.

PMID:
23075437
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Barcoded cDNA library preparation for small RNA profiling by next-generation sequencing.

Hafner M, Renwick N, Farazi TA, Mihailović A, Pena JT, Tuschl T.

Methods. 2012 Oct;58(2):164-70. doi: 10.1016/j.ymeth.2012.07.030. Epub 2012 Aug 7.

PMID:
22885844
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Parallel DNA pyrosequencing unveils new zebrafish microRNAs.

Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA.

BMC Genomics. 2009 Apr 27;10:195. doi: 10.1186/1471-2164-10-195.

PMID:
19397817
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Identification of microRNAs from Amur grape (Vitis amurensis Rupr.) by deep sequencing and analysis of microRNA variations with bioinformatics.

Wang C, Han J, Liu C, Kibet KN, Kayesh E, Shangguan L, Li X, Fang J.

BMC Genomics. 2012 Mar 29;13:122. doi: 10.1186/1471-2164-13-122.

PMID:
22455456
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Bioinformatic analysis of barcoded cDNA libraries for small RNA profiling by next-generation sequencing.

Farazi TA, Brown M, Morozov P, Ten Hoeve JJ, Ben-Dov IZ, Hovestadt V, Hafner M, Renwick N, Mihailović A, Wessels LF, Tuschl T.

Methods. 2012 Oct;58(2):171-87. doi: 10.1016/j.ymeth.2012.07.020. Epub 2012 Jul 23.

PMID:
22836126
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Construction of small RNA cDNA libraries for deep sequencing.

Thomas MF, Ansel KM.

Methods Mol Biol. 2010;667:93-111. doi: 10.1007/978-1-60761-811-9_7.

PMID:
20827529
[PubMed - indexed for MEDLINE]
11.

Identification and characterization of novel amphioxus microRNAs by Solexa sequencing.

Chen X, Li Q, Wang J, Guo X, Jiang X, Ren Z, Weng C, Sun G, Wang X, Liu Y, Ma L, Chen JY, Wang J, Zen K, Zhang J, Zhang CY.

Genome Biol. 2009;10(7):R78. doi: 10.1186/gb-2009-10-7-r78. Epub 2009 Jul 17.

PMID:
19615057
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Micros for microbes: non-coding regulatory RNAs in bacteria.

Gottesman S.

Trends Genet. 2005 Jul;21(7):399-404. Review.

PMID:
15913835
[PubMed - indexed for MEDLINE]
13.

Repertoire of microRNAs in epithelial ovarian cancer as determined by next generation sequencing of small RNA cDNA libraries.

Wyman SK, Parkin RK, Mitchell PS, Fritz BR, O'Briant K, Godwin AK, Urban N, Drescher CW, Knudsen BS, Tewari M.

PLoS One. 2009;4(4):e5311. doi: 10.1371/journal.pone.0005311. Epub 2009 Apr 23.

PMID:
19390579
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Identification and expression-profiling of Xenopus tropicalis miRNAs including plant miRNA-like RNAs at metamorphosis.

Hikosaka A, Takaya K, Jinno M, Kawahara A.

FEBS Lett. 2007 Jun 26;581(16):3013-8. Epub 2007 May 29.

PMID:
17544400
[PubMed - indexed for MEDLINE]
Free Article
15.

Identification and characterization of novel and conserved microRNAs in radish (Raphanus sativus L.) using high-throughput sequencing.

Xu L, Wang Y, Xu Y, Wang L, Zhai L, Zhu X, Gong Y, Ye S, Liu L.

Plant Sci. 2013 Mar;201-202:108-14. doi: 10.1016/j.plantsci.2012.11.010. Epub 2012 Dec 3.

PMID:
23352408
[PubMed - indexed for MEDLINE]
16.

Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection.

Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ.

PLoS One. 2009 Jul 27;4(7):e6349. doi: 10.1371/journal.pone.0006349.

PMID:
19633723
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Identification and characterization of new microRNAs from pig.

Kim J, Cho IS, Hong JS, Choi YK, Kim H, Lee YS.

Mamm Genome. 2008 Aug;19(7-8):570-80. doi: 10.1007/s00335-008-9111-3. Epub 2008 Jun 12.

PMID:
18548309
[PubMed - indexed for MEDLINE]
18.

Identification of intergenic trans-regulatory RNAs containing a disease-linked SNP sequence and targeting cell cycle progression/differentiation pathways in multiple common human disorders.

Glinskii AB, Ma J, Ma S, Grant D, Lim CU, Sell S, Glinsky GV.

Cell Cycle. 2009 Dec;8(23):3925-42. Epub 2009 Dec 17.

PMID:
19923886
[PubMed - indexed for MEDLINE]
Free Article
19.

Identification and profiling of novel microRNAs in the Brassica rapa genome based on small RNA deep sequencing.

Kim B, Yu HJ, Park SG, Shin JY, Oh M, Kim N, Mun JH.

BMC Plant Biol. 2012 Nov 19;12:218. doi: 10.1186/1471-2229-12-218.

PMID:
23163954
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Isolation and profiling of protein-associated small RNAs.

Zhao H, Lii Y, Zhu P, Jin H.

Methods Mol Biol. 2012;883:165-76. doi: 10.1007/978-1-61779-839-9_13.

PMID:
22589133
[PubMed - indexed for MEDLINE]
Free PMC Article
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