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Results: 1 to 20 of 95

1.

Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms.

Postier B, Didonato R Jr, Nevin KP, Liu A, Frank B, Lovley D, Methe BA.

J Microbiol Methods. 2008 Jul;74(1):26-32. Epub 2007 Jul 17.

PMID:
17720265
[PubMed - indexed for MEDLINE]
2.

Microarrays: the use of oligonucleotides and cDNA for the analysis of gene expression.

Barrett JC, Kawasaki ES.

Drug Discov Today. 2003 Feb 1;8(3):134-41. Review.

PMID:
12568783
[PubMed - indexed for MEDLINE]
3.

Microarray and genetic analysis of electron transfer to electrodes in Geobacter sulfurreducens.

Holmes DE, Chaudhuri SK, Nevin KP, Mehta T, Methé BA, Liu A, Ward JE, Woodard TL, Webster J, Lovley DR.

Environ Microbiol. 2006 Oct;8(10):1805-15.

PMID:
16958761
[PubMed - indexed for MEDLINE]
4.

Striptease on glass: validation of an improved stripping procedure for in situ microarrays.

Hahnke K, Jacobsen M, Gruetzkau A, Gruen JR, Koch M, Emoto M, Meyer TF, Walduck A, Kaufmann SH, Mollenkopf HJ.

J Biotechnol. 2007 Jan 30;128(1):1-13. Epub 2006 Sep 16.

PMID:
17084936
[PubMed - indexed for MEDLINE]
5.

Independence and reproducibility across microarray platforms.

Larkin JE, Frank BC, Gavras H, Sultana R, Quackenbush J.

Nat Methods. 2005 May;2(5):337-44. Epub 2005 Apr 21.

PMID:
15846360
[PubMed - indexed for MEDLINE]
Free Article
6.

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Pedotti P, 't Hoen PA, Vreugdenhil E, Schenk GJ, Vossen RH, Ariyurek Y, de Hollander M, Kuiper R, van Ommen GJ, den Dunnen JT, Boer JM, de Menezes RX.

BMC Genomics. 2008 Mar 10;9:124. doi: 10.1186/1471-2164-9-124.

PMID:
18331641
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Transcriptional signatures of normal human mammary epithelial cells in response to benzo[a]pyrene exposure: a comparison of three microarray platforms.

Gwinn MR, Keshava C, Olivero OA, Humsi JA, Poirier MC, Weston A.

OMICS. 2005 Winter;9(4):334-50.

PMID:
16402892
[PubMed - indexed for MEDLINE]
8.

Patient-based cross-platform comparison of oligonucleotide microarray expression profiles.

Schlingemann J, Habtemichael N, Ittrich C, Toedt G, Kramer H, Hambek M, Knecht R, Lichter P, Stauber R, Hahn M.

Lab Invest. 2005 Aug;85(8):1024-39.

PMID:
16205657
[PubMed - indexed for MEDLINE]
Free Article
9.

Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy.

Hu G, Llinás M, Li J, Preiser PR, Bozdech Z.

BMC Bioinformatics. 2007 Sep 19;8:350.

PMID:
17880708
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Advances in spotted microarray resources for expression profiling.

Lyons P.

Brief Funct Genomic Proteomic. 2003 Apr;2(1):21-30. Review.

PMID:
15239940
[PubMed - indexed for MEDLINE]
Free Article
11.

Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens.

Strycharz SM, Glaven RH, Coppi MV, Gannon SM, Perpetua LA, Liu A, Nevin KP, Lovley DR.

Bioelectrochemistry. 2011 Feb;80(2):142-50. doi: 10.1016/j.bioelechem.2010.07.005. Epub 2010 Jul 23.

PMID:
20696622
[PubMed - indexed for MEDLINE]
12.

Measuring global gene expression in polyploidy; a cautionary note from allohexaploid wheat.

Poole R, Barker G, Wilson ID, Coghill JA, Edwards KJ.

Funct Integr Genomics. 2007 Jul;7(3):207-19. Epub 2007 Mar 16.

PMID:
17364174
[PubMed - indexed for MEDLINE]
13.

Construction and use of spotted large-insert clone DNA microarrays for the detection of genomic copy number changes.

Fiegler H, Redon R, Carter NP.

Nat Protoc. 2007;2(3):577-87.

PMID:
17406619
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Transcription factor binding site identification in yeast: a comparison of high-density oligonucleotide and PCR-based microarray platforms.

Borneman AR, Zhang ZD, Rozowsky J, Seringhaus MR, Gerstein M, Snyder M.

Funct Integr Genomics. 2007 Oct;7(4):335-45. Epub 2007 Jul 19.

PMID:
17638031
[PubMed - indexed for MEDLINE]
15.

Spotted long oligonucleotide arrays for human gene expression analysis.

Barczak A, Rodriguez MW, Hanspers K, Koth LL, Tai YC, Bolstad BM, Speed TP, Erle DJ.

Genome Res. 2003 Jul;13(7):1775-85. Epub 2003 Jun 12.

PMID:
12805270
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A comparison of Affymetrix gene expression arrays.

Robinson MD, Speed TP.

BMC Bioinformatics. 2007 Nov 15;8:449.

PMID:
18005448
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments.

Holmes DE, O'Neil RA, Chavan MA, N'Guessan LA, Vrionis HA, Perpetua LA, Larrahondo MJ, DiDonato R, Liu A, Lovley DR.

ISME J. 2009 Feb;3(2):216-30. doi: 10.1038/ismej.2008.89. Epub 2008 Oct 9.

PMID:
18843300
[PubMed - indexed for MEDLINE]
18.

Optimal designs for one- and two-color microarrays using mixed models: a comparative evaluation of their efficiencies.

Lima Passos V, Tan FE, Winkens B, Berger MP.

J Comput Biol. 2009 Jan;16(1):67-83. doi: 10.1089/cmb.2008.0048.

PMID:
19072581
[PubMed - indexed for MEDLINE]
19.

Analysis of CD4+ T-cell gene expression in allergic subjects using two different microarray platforms.

Hansel NN, Cheadle C, Diette GB, Wright J, Thompson KM, Barnes KC, Georas SN.

Allergy. 2008 Mar;63(3):366-9. doi: 10.1111/j.1398-9995.2007.01540.x.

PMID:
18269679
[PubMed - indexed for MEDLINE]
20.

Utilizing tiling microarrays for whole-genome analysis in plants.

Gregory BD, Yazaki J, Ecker JR.

Plant J. 2008 Feb;53(4):636-44. doi: 10.1111/j.1365-313X.2007.03320.x. Review.

PMID:
18269573
[PubMed - indexed for MEDLINE]

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