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Results: 1 to 20 of 120

1.

Global patterns in bacterial diversity.

Lozupone CA, Knight R.

Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11436-40. Epub 2007 Jun 25.

PMID:
17592124
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Salt marsh sediment diversity: a test of the variability of the rare biosphere among environmental replicates.

Bowen JL, Morrison HG, Hobbie JE, Sogin ML.

ISME J. 2012 Nov;6(11):2014-23. doi: 10.1038/ismej.2012.47. Epub 2012 Jun 28.

PMID:
22739491
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Culture-independent analysis of bacterial diversity in a child-care facility.

Lee L, Tin S, Kelley ST.

BMC Microbiol. 2007 Apr 5;7:27.

PMID:
17411442
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Molecular, biochemical, and physiological approaches for understanding the ecology of denitrification.

Goregues CM, Michotey VD, Bonin PC.

Microb Ecol. 2005 Feb;49(2):198-208. Epub 2005 Feb 24.

PMID:
15735940
[PubMed - indexed for MEDLINE]
5.

Relationship between soil properties and patterns of bacterial beta-diversity across reclaimed and natural boreal forest soils.

Dimitriu PA, Grayston SJ.

Microb Ecol. 2010 Apr;59(3):563-73. doi: 10.1007/s00248-009-9590-0. Epub 2009 Oct 15.

PMID:
19830478
[PubMed - indexed for MEDLINE]
6.

Environment drives high phylogenetic turnover among oceanic bacterial communities.

Pommier T, Douzery EJ, Mouillot D.

Biol Lett. 2012 Aug 23;8(4):562-6. doi: 10.1098/rsbl.2011.0990. Epub 2012 Jan 18.

PMID:
22258446
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Levels of bacterial community diversity in four arid soils compared by cultivation and 16S rRNA gene cloning.

Dunbar J, Takala S, Barns SM, Davis JA, Kuske CR.

Appl Environ Microbiol. 1999 Apr;65(4):1662-9.

PMID:
10103265
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Molecular diversity of soil and marine 16S rRNA gene sequences related to beta-subgroup ammonia-oxidizing bacteria.

Stephen JR, McCaig AE, Smith Z, Prosser JI, Embley TM.

Appl Environ Microbiol. 1996 Nov;62(11):4147-54.

PMID:
8900005
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica.

Soo RM, Wood SA, Grzymski JJ, McDonald IR, Cary SC.

Environ Microbiol. 2009 Mar;11(3):715-28. doi: 10.1111/j.1462-2920.2009.01859.x.

PMID:
19278453
[PubMed - indexed for MEDLINE]
10.

Novelty and uniqueness patterns of rare members of the soil biosphere.

Elshahed MS, Youssef NH, Spain AM, Sheik C, Najar FZ, Sukharnikov LO, Roe BA, Davis JP, Schloss PD, Bailey VL, Krumholz LR.

Appl Environ Microbiol. 2008 Sep;74(17):5422-8. doi: 10.1128/AEM.00410-08. Epub 2008 Jul 7.

PMID:
18606799
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment.

DeSantis TZ, Brodie EL, Moberg JP, Zubieta IX, Piceno YM, Andersen GL.

Microb Ecol. 2007 Apr;53(3):371-83. Epub 2007 Mar 2.

PMID:
17334858
[PubMed - indexed for MEDLINE]
12.

Influence of soil characteristics on the diversity of bacteria in the Southern Brazilian Atlantic Forest.

Faoro H, Alves AC, Souza EM, Rigo LU, Cruz LM, Al-Janabi SM, Monteiro RA, Baura VA, Pedrosa FO.

Appl Environ Microbiol. 2010 Jul;76(14):4744-9. doi: 10.1128/AEM.03025-09. Epub 2010 May 21.

PMID:
20495051
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Phylogenetic clustering and overdispersion in bacterial communities.

Horner-Devine MC, Bohannan BJ.

Ecology. 2006 Jul;87(7 Suppl):S100-8.

PMID:
16922306
[PubMed - indexed for MEDLINE]
14.

Archaeal and bacterial communities respond differently to environmental gradients in anoxic sediments of a California hypersaline lake, the Salton Sea.

Swan BK, Ehrhardt CJ, Reifel KM, Moreno LI, Valentine DL.

Appl Environ Microbiol. 2010 Feb;76(3):757-68. doi: 10.1128/AEM.02409-09. Epub 2009 Nov 30.

PMID:
19948847
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Rethinking microbial diversity analysis in the high throughput sequencing era.

Lemos LN, Fulthorpe RR, Triplett EW, Roesch LF.

J Microbiol Methods. 2011 Jul;86(1):42-51. doi: 10.1016/j.mimet.2011.03.014. Epub 2011 Mar 30.

PMID:
21457733
[PubMed - indexed for MEDLINE]
Free Article
16.

Horizon-specific bacterial community composition of German grassland soils, as revealed by pyrosequencing-based analysis of 16S rRNA genes.

Will C, Thürmer A, Wollherr A, Nacke H, Herold N, Schrumpf M, Gutknecht J, Wubet T, Buscot F, Daniel R.

Appl Environ Microbiol. 2010 Oct;76(20):6751-9. doi: 10.1128/AEM.01063-10. Epub 2010 Aug 20.

PMID:
20729324
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Molecular phylogenetic diversity of bacteria and its spatial distribution in composts.

Guo Y, Zhu N, Zhu S, Deng C.

J Appl Microbiol. 2007 Oct;103(4):1344-54.

PMID:
17897238
[PubMed - indexed for MEDLINE]
18.

Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance.

Kembel SW, Wu M, Eisen JA, Green JL.

PLoS Comput Biol. 2012;8(10):e1002743. doi: 10.1371/journal.pcbi.1002743. Epub 2012 Oct 25.

PMID:
23133348
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

[Diversity of bacteria at various depths in the southern part of lake Baikal as detected by 16S rRNA sequencing].

Denisova LIa, Bel'kova NL, Tulokhonov II, Zaĭchikov EF.

Mikrobiologiia. 1999 Jul-Aug;68(4):547-56. Russian.

PMID:
10576092
[PubMed - indexed for MEDLINE]
20.

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea.

Herlemann DP, Labrenz M, Jürgens K, Bertilsson S, Waniek JJ, Andersson AF.

ISME J. 2011 Oct;5(10):1571-9. doi: 10.1038/ismej.2011.41. Epub 2011 Apr 7.

PMID:
21472016
[PubMed - indexed for MEDLINE]
Free PMC Article

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