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Items: 1 to 20 of 105

1.

The genome of the sea urchin Strongylocentrotus purpuratus.

Sea Urchin Genome Sequencing Consortium, Sodergren E, Weinstock GM, Davidson EH, Cameron RA, Gibbs RA, Angerer RC, Angerer LM, Arnone MI, Burgess DR, Burke RD, Coffman JA, Dean M, Elphick MR, Ettensohn CA, Foltz KR, Hamdoun A, Hynes RO, Klein WH, Marzluff W, McClay DR, Morris RL, Mushegian A, Rast JP, Smith LC, Thorndyke MC, Vacquier VD, Wessel GM, Wray G, Zhang L, Elsik CG, Ermolaeva O, Hlavina W, Hofmann G, Kitts P, Landrum MJ, Mackey AJ, Maglott D, Panopoulou G, Poustka AJ, Pruitt K, Sapojnikov V, Song X, Souvorov A, Solovyev V, Wei Z, Whittaker CA, Worley K, Durbin KJ, Shen Y, Fedrigo O, Garfield D, Haygood R, Primus A, Satija R, Severson T, Gonzalez-Garay ML, Jackson AR, Milosavljevic A, Tong M, Killian CE, Livingston BT, Wilt FH, Adams N, Bellé R, Carbonneau S, Cheung R, Cormier P, Cosson B, Croce J, Fernandez-Guerra A, Genevière AM, Goel M, Kelkar H, Morales J, Mulner-Lorillon O, Robertson AJ, Goldstone JV, Cole B, Epel D, Gold B, Hahn ME, Howard-Ashby M, Scally M, Stegeman JJ, Allgood EL, Cool J, Judkins KM, McCafferty SS, Musante AM, Obar RA, Rawson AP, Rossetti BJ, Gibbons IR, Hoffman MP, Leone A, Istrail S, Materna SC, Samanta MP, Stolc V, Tongprasit W, Tu Q, Bergeron KF, Brandhorst BP, Whittle J, Berney K, Bottjer DJ, Calestani C, Peterson K, Chow E, Yuan QA, Elhaik E, Graur D, Reese JT, Bosdet I, Heesun S, Marra MA, Schein J, Anderson MK, Brockton V, Buckley KM, Cohen AH, Fugmann SD, Hibino T, Loza-Coll M, Majeske AJ, Messier C, Nair SV, Pancer Z, Terwilliger DP, Agca C, Arboleda E, Chen N, Churcher AM, Hallböök F, Humphrey GW, Idris MM, Kiyama T, Liang S, Mellott D, Mu X, Murray G, Olinski RP, Raible F, Rowe M, Taylor JS, Tessmar-Raible K, Wang D, Wilson KH, Yaguchi S, Gaasterland T, Galindo BE, Gunaratne HJ, Juliano C, Kinukawa M, Moy GW, Neill AT, Nomura M, Raisch M, Reade A, Roux MM, Song JL, Su YH, Townley IK, Voronina E, Wong JL, Amore G, Branno M, Brown ER, Cavalieri V, Duboc V, Duloquin L, Flytzanis C, Gache C, Lapraz F, Lepage T, Locascio A, Martinez P, Matassi G, Matranga V, Range R, Rizzo F, Röttinger E, Beane W, Bradham C, Byrum C, Glenn T, Hussain S, Manning G, Miranda E, Thomason R, Walton K, Wikramanayke A, Wu SY, Xu R, Brown CT, Chen L, Gray RF, Lee PY, Nam J, Oliveri P, Smith J, Muzny D, Bell S, Chacko J, Cree A, Curry S, Davis C, Dinh H, Dugan-Rocha S, Fowler J, Gill R, Hamilton C, Hernandez J, Hines S, Hume J, Jackson L, Jolivet A, Kovar C, Lee S, Lewis L, Miner G, Morgan M, Nazareth LV, Okwuonu G, Parker D, Pu LL, Thorn R, Wright R.

Science. 2006 Nov 10;314(5801):941-52. Erratum in: Science. 2007 Feb 9;315(5813):766.

2.

Genetics. Sea urchin genome confirms kinship to humans and other vertebrates.

Pennisi E.

Science. 2006 Nov 10;314(5801):908-9. No abstract available.

PMID:
17095665
3.

Genomic insights into the immune system of the sea urchin.

Rast JP, Smith LC, Loza-Coll M, Hibino T, Litman GW.

Science. 2006 Nov 10;314(5801):952-6. Review.

4.

The transcriptome of the sea urchin embryo.

Samanta MP, Tongprasit W, Istrail S, Cameron RA, Tu Q, Davidson EH, Stolc V.

Science. 2006 Nov 10;314(5801):960-2.

5.

The sea urchin genome: where will it lead us?

Davidson EH.

Science. 2006 Nov 10;314(5801):939-40.

PMID:
17095689
6.

Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters.

Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H.

Genome Res. 2003 Dec;13(12):2736-46.

7.

Characterization of insulin-like peptides (ILPs) in the sea urchin Strongylocentrotus purpuratus: insights on the evolution of the insulin family.

Perillo M, Arnone MI.

Gen Comp Endocrinol. 2014 Sep 1;205:68-79. doi: 10.1016/j.ygcen.2014.06.014. Epub 2014 Jun 24.

PMID:
24971803
8.

The sea urchin genome as a window on function.

Materna SC, Cameron RA.

Biol Bull. 2008 Jun;214(3):266-73.

9.

A genome-wide analysis of biomineralization-related proteins in the sea urchin Strongylocentrotus purpuratus.

Livingston BT, Killian CE, Wilt F, Cameron A, Landrum MJ, Ermolaeva O, Sapojnikov V, Maglott DR, Buchanan AM, Ettensohn CA.

Dev Biol. 2006 Dec 1;300(1):335-48. Epub 2006 Aug 15.

10.

Developmental cis-regulatory analysis of the cyclin D gene in the sea urchin Strongylocentrotus purpuratus.

McCarty CM, Coffman JA.

Biochem Biophys Res Commun. 2013 Oct 25;440(3):413-8. doi: 10.1016/j.bbrc.2013.09.094. Epub 2013 Oct 1.

11.

An Sp185/333 gene cluster from the purple sea urchin and putative microsatellite-mediated gene diversification.

Miller CA, Buckley KM, Easley RL, Smith LC.

BMC Genomics. 2010 Oct 18;11:575. doi: 10.1186/1471-2164-11-575.

12.
13.

Diversification of innate immune genes: lessons from the purple sea urchin.

Smith LC.

Dis Model Mech. 2010 May-Jun;3(5-6):274-9. doi: 10.1242/dmm.004697. Epub 2010 Mar 30.

14.

The 185/333 gene family is a rapidly diversifying host-defense gene cluster in the purple sea urchin Strongylocentrotus purpuratus.

Buckley KM, Munshaw S, Kepler TB, Smith LC.

J Mol Biol. 2008 Jun 13;379(4):912-28. doi: 10.1016/j.jmb.2008.04.037. Epub 2008 Apr 22.

PMID:
18482736
15.

Unexpected diversity displayed in cDNAs expressed by the immune cells of the purple sea urchin, Strongylocentrotus purpuratus.

Terwilliger DP, Buckley KM, Mehta D, Moorjani PG, Smith LC.

Physiol Genomics. 2006 Jul 12;26(2):134-44.

16.

SpBase: the sea urchin genome database and web site.

Cameron RA, Samanta M, Yuan A, He D, Davidson E.

Nucleic Acids Res. 2009 Jan;37(Database issue):D750-4. doi: 10.1093/nar/gkn887. Epub 2008 Nov 14.

17.

Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis.

Tu Q, Cameron RA, Worley KC, Gibbs RA, Davidson EH.

Genome Res. 2012 Oct;22(10):2079-87. doi: 10.1101/gr.139170.112. Epub 2012 Jun 18.

18.

Quantitative developmental transcriptomes of the sea urchin Strongylocentrotus purpuratus.

Tu Q, Cameron RA, Davidson EH.

Dev Biol. 2014 Jan 15;385(2):160-7. doi: 10.1016/j.ydbio.2013.11.019. Epub 2013 Nov 26.

20.

Select microRNAs are essential for early development in the sea urchin.

Song JL, Stoeckius M, Maaskola J, Friedländer M, Stepicheva N, Juliano C, Lebedeva S, Thompson W, Rajewsky N, Wessel GM.

Dev Biol. 2012 Feb 1;362(1):104-13. doi: 10.1016/j.ydbio.2011.11.015. Epub 2011 Dec 3.

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