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Results: 1 to 20 of 136

1.

Small non-coding RNAs and the bacterial outer membrane.

Vogel J, Papenfort K.

Curr Opin Microbiol. 2006 Dec;9(6):605-11. Epub 2006 Oct 20. Review.

PMID:
17055775
[PubMed - indexed for MEDLINE]
2.

Down-regulation of outer membrane proteins by noncoding RNAs: unraveling the cAMP-CRP- and sigmaE-dependent CyaR-ompX regulatory case.

Johansen J, Eriksen M, Kallipolitis B, Valentin-Hansen P.

J Mol Biol. 2008 Oct 31;383(1):1-9. doi: 10.1016/j.jmb.2008.06.058. Epub 2008 Jun 28.

PMID:
18619465
[PubMed - indexed for MEDLINE]
3.

Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins.

Johansen J, Rasmussen AA, Overgaard M, Valentin-Hansen P.

J Mol Biol. 2006 Nov 17;364(1):1-8. Epub 2006 Sep 8.

PMID:
17007876
[PubMed - indexed for MEDLINE]
4.

SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay.

Papenfort K, Pfeiffer V, Mika F, Lucchini S, Hinton JC, Vogel J.

Mol Microbiol. 2006 Dec;62(6):1674-88.

PMID:
17427289
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Loss of Hfq activates the sigmaE-dependent envelope stress response in Salmonella enterica.

Figueroa-Bossi N, Lemire S, Maloriol D, Balbontín R, Casadesús J, Bossi L.

Mol Microbiol. 2006 Nov;62(3):838-52. Epub 2006 Sep 25.

PMID:
16999834
[PubMed - indexed for MEDLINE]
6.

How to find small non-coding RNAs in bacteria.

Vogel J, Sharma CM.

Biol Chem. 2005 Dec;386(12):1219-38. Review.

PMID:
16336117
[PubMed - indexed for MEDLINE]
7.

Small RNAs controlling outer membrane porins.

Valentin-Hansen P, Johansen J, Rasmussen AA.

Curr Opin Microbiol. 2007 Apr;10(2):152-5. Epub 2007 Mar 21. Review.

PMID:
17369078
[PubMed - indexed for MEDLINE]
8.

A conserved small RNA promotes silencing of the outer membrane protein YbfM.

Rasmussen AA, Johansen J, Nielsen JS, Overgaard M, Kallipolitis B, Valentin-Hansen P.

Mol Microbiol. 2009 May;72(3):566-77. doi: 10.1111/j.1365-2958.2009.06688.x.

PMID:
19400782
[PubMed - indexed for MEDLINE]
9.

A rough guide to the non-coding RNA world of Salmonella.

Vogel J.

Mol Microbiol. 2009 Jan;71(1):1-11. doi: 10.1111/j.1365-2958.2008.06505.x. Epub 2008 Nov 4. Review.

PMID:
19007416
[PubMed - indexed for MEDLINE]
10.

sRNAMap: genomic maps for small non-coding RNAs, their regulators and their targets in microbial genomes.

Huang HY, Chang HY, Chou CH, Tseng CP, Ho SY, Yang CD, Ju YW, Huang HD.

Nucleic Acids Res. 2009 Jan;37(Database issue):D150-4. doi: 10.1093/nar/gkn852. Epub 2008 Nov 16.

PMID:
19015153
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genome-wide search reveals a novel GacA-regulated small RNA in Pseudomonas species.

González N, Heeb S, Valverde C, Kay E, Reimmann C, Junier T, Haas D.

BMC Genomics. 2008 Apr 13;9:167. doi: 10.1186/1471-2164-9-167.

PMID:
18405392
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Modulating the bacterial surface with small RNAs: a new twist on PhoP/Q-mediated lipopolysaccharide modification.

Overgaard M, Kallipolitis B, Valentin-Hansen P.

Mol Microbiol. 2009 Dec;74(6):1289-94. doi: 10.1111/j.1365-2958.2009.06943.x. Epub 2009 Nov 10.

PMID:
19906183
[PubMed - indexed for MEDLINE]
13.

A small RNA downregulates LamB maltoporin in Salmonella.

Bossi L, Figueroa-Bossi N.

Mol Microbiol. 2007 Aug;65(3):799-810. Epub 2007 Jul 3.

PMID:
17608792
[PubMed - indexed for MEDLINE]
14.

Translational control and target recognition by Escherichia coli small RNAs in vivo.

Urban JH, Vogel J.

Nucleic Acids Res. 2007;35(3):1018-37. Epub 2007 Jan 30.

PMID:
17264113
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon.

Gogol EB, Rhodius VA, Papenfort K, Vogel J, Gross CA.

Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12875-80. doi: 10.1073/pnas.1109379108. Epub 2011 Jul 18.

PMID:
21768388
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Changes in lipopolysaccharide structure induce the sigma(E)-dependent response of Escherichia coli.

Tam C, Missiakas D.

Mol Microbiol. 2005 Mar;55(5):1403-12.

PMID:
15720549
[PubMed - indexed for MEDLINE]
17.

Regulation of gene expression by small non-coding RNAs: a quantitative view.

Shimoni Y, Friedlander G, Hetzroni G, Niv G, Altuvia S, Biham O, Margalit H.

Mol Syst Biol. 2007;3:138. Epub 2007 Sep 25.

PMID:
17893699
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Proteins that interact with bacterial small RNA regulators.

Pichon C, Felden B.

FEMS Microbiol Rev. 2007 Sep;31(5):614-25. Epub 2007 Jul 26. Review.

PMID:
17655690
[PubMed - indexed for MEDLINE]
19.

Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level.

Papenfort K, Vogel J.

Res Microbiol. 2009 May;160(4):278-87. doi: 10.1016/j.resmic.2009.03.004. Epub 2009 Apr 12. Review.

PMID:
19366629
[PubMed - indexed for MEDLINE]
20.

A conserved small RNA promotes discoordinate expression of the glmUS operon mRNA to activate GlmS synthesis.

Urban JH, Papenfort K, Thomsen J, Schmitz RA, Vogel J.

J Mol Biol. 2007 Oct 26;373(3):521-8. Epub 2007 Aug 2.

PMID:
17854828
[PubMed - indexed for MEDLINE]

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