Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 109

Similar articles for PubMed (Select 16854231)

1.

MANET: tracing evolution of protein architecture in metabolic networks.

Kim HS, Mittenthal JE, Caetano-Anollés G.

BMC Bioinformatics. 2006 Jul 19;7:351.

2.

The origin of modern metabolic networks inferred from phylogenomic analysis of protein architecture.

Caetano-Anollés G, Kim HS, Mittenthal JE.

Proc Natl Acad Sci U S A. 2007 May 29;104(22):9358-63. Epub 2007 May 21.

3.

New methods for joint analysis of biological networks and expression data.

Sohler F, Hanisch D, Zimmer R.

Bioinformatics. 2004 Jul 10;20(10):1517-21.

4.

SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.

Teyra J, Doms A, Schroeder M, Pisabarro MT.

BMC Bioinformatics. 2006 Mar 2;7:104.

5.

Visualisation and navigation methods for typed protein-protein interaction networks.

Friedrich C, Schreiber F.

Appl Bioinformatics. 2003;2(3 Suppl):S19-24.

PMID:
15130812
6.

The origin and evolution of modern metabolism.

Caetano-Anollés G, Yafremava LS, Gee H, Caetano-Anollés D, Kim HS, Mittenthal JE.

Int J Biochem Cell Biol. 2009 Feb;41(2):285-97. doi: 10.1016/j.biocel.2008.08.022. Epub 2008 Aug 26. Review.

PMID:
18790074
7.

DIG--a system for gene annotation and functional discovery.

Delong M, Yao G, Wang Q, Dobra A, Black EP, Chang JT, Bild A, West M, Nevins JR, Dressman H.

Bioinformatics. 2005 Jul 1;21(13):2957-9. Epub 2005 May 3.

8.

Widespread recruitment of ancient domain structures in modern enzymes during metabolic evolution.

Kim HS, Mittenthal JE, Caetano-Anollés G.

J Integr Bioinform. 2013 Feb 14;10(1):214. doi: 10.2390/biecoll-jib-2013-214.

PMID:
23406778
9.

Using the KEGG database resource.

Aoki KF, Kanehisa M.

Curr Protoc Bioinformatics. 2005 Oct;Chapter 1:Unit 1.12. doi: 10.1002/0471250953.bi0112s11.

PMID:
18428742
10.

Evolutionary cores of domain co-occurrence networks.

Wuchty S, Almaas E.

BMC Evol Biol. 2005 Mar 23;5:24.

11.

PIANA: protein interactions and network analysis.

Aragues R, Jaeggi D, Oliva B.

Bioinformatics. 2006 Apr 15;22(8):1015-7. Epub 2006 Mar 1.

12.

Biomolecular interaction network database.

Gilbert D.

Brief Bioinform. 2005 Jun;6(2):194-8. Review.

13.

Web-based information retrieval system for the prediction of metabolic pathways.

Chen M, Hofestädt R.

IEEE Trans Nanobioscience. 2004 Sep;3(3):192-9.

PMID:
15473071
14.

2.5D visualisation of overlapping biological networks.

Fung DC, Hong SH, Koschützki D, Schreiber F, Xu K.

J Integr Bioinform. 2008 Nov 10;5(1). doi: 10.2390/biecoll-jib-2008-90.

PMID:
20134057
15.

DWARF--a data warehouse system for analyzing protein families.

Fischer M, Thai QK, Grieb M, Pleiss J.

BMC Bioinformatics. 2006 Nov 9;7:495.

16.

A query language for biological networks.

Leser U.

Bioinformatics. 2005 Sep 1;21 Suppl 2:ii33-9.

17.

Searching, viewing, and visualizing data in the Biomolecular Interaction Network Database (BIND).

Willis RC, Hogue CW.

Curr Protoc Bioinformatics. 2006 Jan;Chapter 8:Unit 8.9. doi: 10.1002/0471250953.bi0809s12.

PMID:
18428770
18.

Towards zoomable multidimensional maps of the cell.

Hu Z, Mellor J, Wu J, Kanehisa M, Stuart JM, DeLisi C.

Nat Biotechnol. 2007 May;25(5):547-54. Review.

PMID:
17483841
19.

PIMWalker: visualising protein interaction networks using the HUPO PSI molecular interaction format.

Meil A, Durand P, Wojcik J.

Appl Bioinformatics. 2005;4(2):137-9.

PMID:
16128615
20.

ProtBuD: a database of biological unit structures of protein families and superfamilies.

Xu Q, Canutescu A, Obradovic Z, Dunbrack RL Jr.

Bioinformatics. 2006 Dec 1;22(23):2876-82. Epub 2006 Oct 2. Erratum in: Bioinformatics. 2007 Aug;23(15):2028.

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk