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Items: 1 to 20 of 569

1.

The structure of the RNA m5C methyltransferase YebU from Escherichia coli reveals a C-terminal RNA-recruiting PUA domain.

Hallberg BM, Ericsson UB, Johnson KA, Andersen NM, Douthwaite S, Nordlund P, Beuscher AE 4th, Erlandsen H.

J Mol Biol. 2006 Jul 21;360(4):774-87. Epub 2006 Jun 6.

PMID:
16793063
2.

YebU is a m5C methyltransferase specific for 16 S rRNA nucleotide 1407.

Andersen NM, Douthwaite S.

J Mol Biol. 2006 Jun 9;359(3):777-86. Epub 2006 Apr 21.

PMID:
16678201
3.

Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes.

Sunita S, Tkaczuk KL, Purta E, Kasprzak JM, Douthwaite S, Bujnicki JM, Sivaraman J.

J Mol Biol. 2008 Nov 14;383(3):652-66. doi: 10.1016/j.jmb.2008.08.062. Epub 2008 Aug 29.

PMID:
18789337
4.

YccW is the m5C methyltransferase specific for 23S rRNA nucleotide 1962.

Purta E, O'Connor M, Bujnicki JM, Douthwaite S.

J Mol Biol. 2008 Nov 14;383(3):641-51. doi: 10.1016/j.jmb.2008.08.061. Epub 2008 Aug 29.

PMID:
18786544
5.
6.

Insights into the catalytic mechanism of 16S rRNA methyltransferase RsmE (m³U1498) from crystal and solution structures.

Zhang H, Wan H, Gao ZQ, Wei Y, Wang WJ, Liu GF, Shtykova EV, Xu JH, Dong YH.

J Mol Biol. 2012 Nov 2;423(4):576-89. doi: 10.1016/j.jmb.2012.08.016. Epub 2012 Aug 25.

PMID:
22925577
7.

Crystal structure of ErmC', an rRNA methyltransferase which mediates antibiotic resistance in bacteria.

Bussiere DE, Muchmore SW, Dealwis CG, Schluckebier G, Nienaber VL, Edalji RP, Walter KA, Ladror US, Holzman TF, Abad-Zapatero C.

Biochemistry. 1998 May 19;37(20):7103-12.

PMID:
9585521
8.

Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.

Demirci H, Larsen LH, Hansen T, Rasmussen A, Cadambi A, Gregory ST, Kirpekar F, Jogl G.

RNA. 2010 Aug;16(8):1584-96. doi: 10.1261/rna.2088310. Epub 2010 Jun 17.

9.

Structure of an archaeal homologue of the bacterial Fmu/RsmB/RrmB rRNA cytosine 5-methyltransferase.

Hikida Y, Kuratani M, Bessho Y, Sekine SI, Yokoyama S.

Acta Crystallogr D Biol Crystallogr. 2010 Dec;66(Pt 12):1301-7. doi: 10.1107/S0907444910037558. Epub 2010 Nov 16.

PMID:
21123870
10.

Structure of the 16S rRNA pseudouridine synthase RsuA bound to uracil and UMP.

Sivaraman J, Sauvé V, Larocque R, Stura EA, Schrag JD, Cygler M, Matte A.

Nat Struct Biol. 2002 May;9(5):353-8.

PMID:
11953756
11.

Structural insights into the interaction of the Nip7 PUA domain with polyuridine RNA.

Coltri PP, Guimarães BG, Granato DC, Luz JS, Teixeira EC, Oliveira CC, Zanchin NI.

Biochemistry. 2007 Dec 11;46(49):14177-87. Epub 2007 Nov 15.

PMID:
18001138
12.
13.

The structure of the RlmB 23S rRNA methyltransferase reveals a new methyltransferase fold with a unique knot.

Michel G, Sauvé V, Larocque R, Li Y, Matte A, Cygler M.

Structure. 2002 Oct;10(10):1303-15.

14.

Intrinsic resistance to aminoglycosides in Enterococcus faecium is conferred by the 16S rRNA m5C1404-specific methyltransferase EfmM.

Galimand M, Schmitt E, Panvert M, Desmolaize B, Douthwaite S, Mechulam Y, Courvalin P.

RNA. 2011 Feb;17(2):251-62. doi: 10.1261/rna.2233511. Epub 2010 Dec 15.

15.

Detailed analysis of RNA-protein interactions within the ribosomal protein S8-rRNA complex from the archaeon Methanococcus jannaschii.

Tishchenko S, Nikulin A, Fomenkova N, Nevskaya N, Nikonov O, Dumas P, Moine H, Ehresmann B, Ehresmann C, Piendl W, Lamzin V, Garber M, Nikonov S.

J Mol Biol. 2001 Aug 10;311(2):311-24.

PMID:
11478863
16.
17.

The aminoglycoside resistance methyltransferase Sgm impedes RsmF methylation at an adjacent rRNA nucleotide in the ribosomal A site.

Cubrilo S, Babić F, Douthwaite S, Maravić Vlahovicek G.

RNA. 2009 Aug;15(8):1492-7. doi: 10.1261/rna.1618809. Epub 2009 Jun 9.

18.

Crystal structure of RlmM, the 2'O-ribose methyltransferase for C2498 of Escherichia coli 23S rRNA.

Punekar AS, Shepherd TR, Liljeruhm J, Forster AC, Selmer M.

Nucleic Acids Res. 2012 Nov 1;40(20):10507-20. doi: 10.1093/nar/gks727. Epub 2012 Aug 25.

19.
20.

Binding of adenosine-based ligands to the MjDim1 rRNA methyltransferase: implications for reaction mechanism and drug design.

O'Farrell HC, Musayev FN, Scarsdale JN, Rife JP.

Biochemistry. 2010 Mar 30;49(12):2697-704. doi: 10.1021/bi901875x.

PMID:
20163168
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