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Similar articles for PubMed (Select 16502467)

1.

Feature extraction in the analysis of proteomic mass spectra.

Wang X, Zhu W, Pradhan K, Ji C, Ma Y, Semmes OJ, Glimm J, Mitchell J.

Proteomics. 2006 Apr;6(7):2095-100. Erratum in: Proteomics. 2006 Jul;6(14):4203.

PMID:
16502467
2.

Processing and classification of protein mass spectra.

Hilario M, Kalousis A, Pellegrini C, Müller M.

Mass Spectrom Rev. 2006 May-Jun;25(3):409-49. Review.

PMID:
16463283
3.

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.

Brusniak MY, Bodenmiller B, Campbell D, Cooke K, Eddes J, Garbutt A, Lau H, Letarte S, Mueller LN, Sharma V, Vitek O, Zhang N, Aebersold R, Watts JD.

BMC Bioinformatics. 2008 Dec 16;9:542. doi: 10.1186/1471-2105-9-542.

4.

Functional genomics and proteomics in the clinical neurosciences: data mining and bioinformatics.

Phan JH, Quo CF, Wang MD.

Prog Brain Res. 2006;158:83-108. Review.

PMID:
17027692
5.

Statistical and computational methods for comparative proteomic profiling using liquid chromatography-tandem mass spectrometry.

Listgarten J, Emili A.

Mol Cell Proteomics. 2005 Apr;4(4):419-34. Epub 2005 Mar 1. Review.

6.

Global and targeted quantitative proteomics for biomarker discovery.

Veenstra TD.

J Chromatogr B Analyt Technol Biomed Life Sci. 2007 Feb 15;847(1):3-11. Epub 2006 Oct 4. Review.

PMID:
17023222
7.

Identification of biomarkers from mass spectrometry data using a "common" peak approach.

Fushiki T, Fujisawa H, Eguchi S.

BMC Bioinformatics. 2006 Jul 26;7:358.

8.
9.

Data mining techniques for cancer detection using serum proteomic profiling.

Li L, Tang H, Wu Z, Gong J, Gruidl M, Zou J, Tockman M, Clark RA.

Artif Intell Med. 2004 Oct;32(2):71-83. Review.

PMID:
15364092
10.

Simultaneous and exact interval estimates for the contrast of two groups based on an extremely high dimensional variable: application to mass spec data.

Park Y, Downing SR, Kim D, Hahn WC, Li C, Kantoff PW, Wei LJ.

Bioinformatics. 2007 Jun 15;23(12):1451-8. Epub 2007 Apr 25.

11.
12.

A scale space approach for unsupervised feature selection in mass spectra classification for ovarian cancer detection.

Ceccarelli M, d'Acierno A, Facchiano A.

BMC Bioinformatics. 2009 Oct 15;10 Suppl 12:S9. doi: 10.1186/1471-2105-10-S12-S9.

13.

Proteomic data analysis workflow for discovery of candidate biomarker peaks predictive of clinical outcome for patients with acute myeloid leukemia.

Forshed J, Pernemalm M, Tan CS, Lindberg M, Kanter L, Pawitan Y, Lewensohn R, Stenke L, Lehtiö J.

J Proteome Res. 2008 Jun;7(6):2332-41. doi: 10.1021/pr070482e. Epub 2008 May 2.

PMID:
18452325
14.

Discovery of regulatory molecular events and biomarkers using 2D capillary chromatography and mass spectrometry.

Powell DW, Merchant ML, Link AJ.

Expert Rev Proteomics. 2006 Feb;3(1):63-74. Review.

PMID:
16445351
15.

Recent developments in proteome informatics for mass spectrometry analysis.

Wright JC, Hubbard SJ.

Comb Chem High Throughput Screen. 2009 Feb;12(2):194-202. Review.

PMID:
19199887
16.

Pre-analytic saliva processing affect proteomic results and biomarker screening of head and neck squamous carcinoma.

Ohshiro K, Rosenthal DI, Koomen JM, Streckfus CF, Chambers M, Kobayashi R, El-Naggar AK.

Int J Oncol. 2007 Mar;30(3):743-9.

PMID:
17273777
17.

Proteomic-based biomarker discovery with emphasis on cerebrospinal fluid and multiple sclerosis.

Berven FS, Flikka K, Berle M, Vedeler C, Ulvik RJ.

Curr Pharm Biotechnol. 2006 Jun;7(3):147-58. Review.

PMID:
16789900
18.

Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer.

Whiteaker JR, Zhang H, Zhao L, Wang P, Kelly-Spratt KS, Ivey RG, Piening BD, Feng LC, Kasarda E, Gurley KE, Eng JK, Chodosh LA, Kemp CJ, McIntosh MW, Paulovich AG.

J Proteome Res. 2007 Oct;6(10):3962-75. Epub 2007 Aug 21.

PMID:
17711321
19.

Feature extraction and dimensionality reduction for mass spectrometry data.

Liu Y.

Comput Biol Med. 2009 Sep;39(9):818-23. doi: 10.1016/j.compbiomed.2009.06.012. Epub 2009 Jul 30.

PMID:
19646687
20.

Clinical proteomics: the promises and challenges of mass spectrometry-based biomarker discovery.

deVera IE, Katz JE, Agus DB.

Clin Adv Hematol Oncol. 2006 Jul;4(7):541-9.

PMID:
17147241
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