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Results: 1 to 20 of 113

1.

Genomic scans for selective sweeps using SNP data.

Nielsen R, Williamson S, Kim Y, Hubisz MJ, Clark AG, Bustamante C.

Genome Res. 2005 Nov;15(11):1566-75.

PMID:
16251466
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Scanning for genomic regions subject to selective sweeps using SNP-MaP strategy.

Deng L, Tang X, Chen W, Lin J, Lai Z, Liu Z, Zhang D.

Genomics Proteomics Bioinformatics. 2010 Dec;8(4):256-61. doi: 10.1016/S1672-0229(10)60027-7.

PMID:
21382594
[PubMed - indexed for MEDLINE]
Free Article
3.

A new approach for using genome scans to detect recent positive selection in the human genome.

Tang K, Thornton KR, Stoneking M.

PLoS Biol. 2007 Jul;5(7):e171. Epub 2007 Jun 19.

PMID:
17579516
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A practical genome scan for population-specific strong selective sweeps that have reached fixation.

Kimura R, Fujimoto A, Tokunaga K, Ohashi J.

PLoS One. 2007 Mar 14;2(3):e286.

PMID:
17356696
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Identifying selected regions from heterozygosity and divergence using a light-coverage genomic dataset from two human populations.

Oleksyk TK, Zhao K, De La Vega FM, Gilbert DA, O'Brien SJ, Smith MW.

PLoS One. 2008 Mar 5;3(3):e1712. doi: 10.1371/journal.pone.0001712.

PMID:
18320033
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Population differentiation as a test for selective sweeps.

Chen H, Patterson N, Reich D.

Genome Res. 2010 Mar;20(3):393-402. doi: 10.1101/gr.100545.109. Epub 2010 Jan 19.

PMID:
20086244
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Linkage disequilibrium as a signature of selective sweeps.

Kim Y, Nielsen R.

Genetics. 2004 Jul;167(3):1513-24.

PMID:
15280259
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

ATRIUM: testing untyped SNPs in case-control association studies with related individuals.

Wang Z, McPeek MS.

Am J Hum Genet. 2009 Nov;85(5):667-78. doi: 10.1016/j.ajhg.2009.10.006.

PMID:
19913122
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Disentangling the effects of demography and selection in human history.

Stajich JE, Hahn MW.

Mol Biol Evol. 2005 Jan;22(1):63-73. Epub 2004 Sep 8.

PMID:
15356276
[PubMed - indexed for MEDLINE]
Free Article
10.

Power-based, phase-informed selection of single nucleotide polymorphisms for disease association screens.

Saccone SF, Rice JP, Saccone NL.

Genet Epidemiol. 2006 Sep;30(6):459-70.

PMID:
16685721
[PubMed - indexed for MEDLINE]
11.

Whole-genome patterns of common DNA variation in three human populations.

Hinds DA, Stuve LL, Nilsen GB, Halperin E, Eskin E, Ballinger DG, Frazer KA, Cox DR.

Science. 2005 Feb 18;307(5712):1072-9.

PMID:
15718463
[PubMed - indexed for MEDLINE]
Free Article
12.

Detection of selective sweeps in cattle using genome-wide SNP data.

Ramey HR, Decker JE, McKay SD, Rolf MM, Schnabel RD, Taylor JF.

BMC Genomics. 2013 Jun 7;14:382. doi: 10.1186/1471-2164-14-382.

PMID:
23758707
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Genetically indistinguishable SNPs and their influence on inferring the location of disease-associated variants.

Lawrence R, Evans DM, Morris AP, Ke X, Hunt S, Paolucci M, Ragoussis J, Deloukas P, Bentley D, Cardon LR.

Genome Res. 2005 Nov;15(11):1503-10.

PMID:
16251460
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A whole genome long-range haplotype (WGLRH) test for detecting imprints of positive selection in human populations.

Zhang C, Bailey DK, Awad T, Liu G, Xing G, Cao M, Valmeekam V, Retief J, Matsuzaki H, Taub M, Seielstad M, Kennedy GC.

Bioinformatics. 2006 Sep 1;22(17):2122-8. Epub 2006 Jul 15.

PMID:
16845142
[PubMed - indexed for MEDLINE]
Free Article
15.

Detecting positive selection from genome scans of linkage disequilibrium.

Huff CD, Harpending HC, Rogers AR.

BMC Genomics. 2010 Jan 5;11:8. doi: 10.1186/1471-2164-11-8.

PMID:
20051139
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Characterization of X-linked SNP genotypic variation in globally distributed human populations.

Casto AM, Li JZ, Absher D, Myers R, Ramachandran S, Feldman MW.

Genome Biol. 2010 Jan 28;11(1):R10. doi: 10.1186/gb-2010-11-1-r10.

PMID:
20109212
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Stronger signal of recent selection for lactase persistence in Maasai than in Europeans.

Schlebusch CM, Sjödin P, Skoglund P, Jakobsson M.

Eur J Hum Genet. 2013 May;21(5):550-3. doi: 10.1038/ejhg.2012.199. Epub 2012 Sep 5.

PMID:
22948027
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data.

Lohmueller KE, Bustamante CD, Clark AG.

Genetics. 2009 May;182(1):217-31. doi: 10.1534/genetics.108.099275. Epub 2009 Mar 2.

PMID:
19255370
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

How reliable are empirical genomic scans for selective sweeps?

Teshima KM, Coop G, Przeworski M.

Genome Res. 2006 Jun;16(6):702-12. Epub 2006 May 10.

PMID:
16687733
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Accuracy of genome-wide imputation of untyped markers and impacts on statistical power for association studies.

Hao K, Chudin E, McElwee J, Schadt EE.

BMC Genet. 2009 Jun 16;10:27. doi: 10.1186/1471-2156-10-27.

PMID:
19531258
[PubMed - indexed for MEDLINE]
Free PMC Article

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