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Results: 1 to 20 of 122

1.

Phosphorylation states of cell cycle and DNA repair proteins can be altered by the nsSNPs.

Savas S, Ozcelik H.

BMC Cancer. 2005 Aug 19;5:107.

PMID:
16111488
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Candidate nsSNPs that can affect the functions and interactions of cell cycle proteins.

Savas S, Ahmad MF, Shariff M, Kim DY, Ozcelik H.

Proteins. 2005 Feb 15;58(3):697-705.

PMID:
15617026
[PubMed - indexed for MEDLINE]
3.

Identifying functional genetic variants in DNA repair pathway using protein conservation analysis.

Savas S, Kim DY, Ahmad MF, Shariff M, Ozcelik H.

Cancer Epidemiol Biomarkers Prev. 2004 May;13(5):801-7.

PMID:
15159313
[PubMed - indexed for MEDLINE]
Free Article
4.

Computational prediction of the effects of non-synonymous single nucleotide polymorphisms in human DNA repair genes.

Nakken S, Alseth I, Rognes T.

Neuroscience. 2007 Apr 14;145(4):1273-9. Epub 2006 Oct 19. Review.

PMID:
17055652
[PubMed - indexed for MEDLINE]
5.

Human non-synonymous single nucleotide polymorphisms can influence ubiquitin-mediated protein degradation.

Savas S, Shariff M, Taylor IW, Ozcelik H.

OMICS. 2007 Summer;11(2):200-8.

PMID:
17594238
[PubMed - indexed for MEDLINE]
6.

Bladder cancer predisposition: a multigenic approach to DNA-repair and cell-cycle-control genes.

Wu X, Gu J, Grossman HB, Amos CI, Etzel C, Huang M, Zhang Q, Millikan RE, Lerner S, Dinney CP, Spitz MR.

Am J Hum Genet. 2006 Mar;78(3):464-79. Epub 2006 Jan 31.

PMID:
16465622
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genetic variation and the mitogen-activated protein kinase (MAPK) signaling pathway.

Cho S, Savas S, Ozcelik H.

OMICS. 2006 Spring;10(1):66-81.

PMID:
16584319
[PubMed - indexed for MEDLINE]
8.

Identification and structural comparison of deleterious mutations in nsSNPs of ABL1 gene in chronic myeloid leukemia: a bio-informatics study.

George Priya Doss C, Sudandiradoss C, Rajasekaran R, Purohit R, Ramanathan K, Sethumadhavan R.

J Biomed Inform. 2008 Aug;41(4):607-12. doi: 10.1016/j.jbi.2007.12.004. Epub 2007 Dec 31.

PMID:
18243808
[PubMed - indexed for MEDLINE]
Free Article
9.

Structural location of disease-associated single-nucleotide polymorphisms.

Stitziel NO, Tseng YY, Pervouchine D, Goddeau D, Kasif S, Liang J.

J Mol Biol. 2003 Apr 11;327(5):1021-30.

PMID:
12662927
[PubMed - indexed for MEDLINE]
10.

topoSNP: a topographic database of non-synonymous single nucleotide polymorphisms with and without known disease association.

Stitziel NO, Binkowski TA, Tseng YY, Kasif S, Liang J.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D520-2.

PMID:
14681472
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Applications of computational algorithm tools to identify functional SNPs in cytokine genes.

Shen J, Deininger PL, Zhao H.

Cytokine. 2006 Jul;35(1-2):62-6. Epub 2006 Aug 17.

PMID:
16919468
[PubMed - indexed for MEDLINE]
12.

Functional nonsynonymous single nucleotide polymorphisms from the TGF-beta protein interaction network.

Savas S, Taylor IW, Wrana JL, Ozcelik H.

Physiol Genomics. 2007 Apr 24;29(2):109-17. Epub 2006 Dec 26.

PMID:
17190851
[PubMed - indexed for MEDLINE]
Free Article
13.

Approaches and resources for prediction of the effects of non-synonymous single nucleotide polymorphism on protein function and interactions.

Teng S, Michonova-Alexova E, Alexov E.

Curr Pharm Biotechnol. 2008 Apr;9(2):123-33. Review.

PMID:
18393868
[PubMed - indexed for MEDLINE]
14.

Predicting deleterious nsSNPs: an analysis of sequence and structural attributes.

Dobson RJ, Munroe PB, Caulfield MJ, Saqi MA.

BMC Bioinformatics. 2006 Apr 21;7:217.

PMID:
16630345
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identification and in silico analysis of functional SNPs of the BRCA1 gene.

Rajasekaran R, Sudandiradoss C, Doss CG, Sethumadhavan R.

Genomics. 2007 Oct;90(4):447-52. Epub 2007 Aug 27.

PMID:
17719744
[PubMed - indexed for MEDLINE]
Free Article
16.

A structural bioinformatics approach to the analysis of nonsynonymous single nucleotide polymorphisms (nsSNPs) and their relation to disease.

Worth CL, Bickerton GR, Schreyer A, Forman JR, Cheng TM, Lee S, Gong S, Burke DF, Blundell TL.

J Bioinform Comput Biol. 2007 Dec;5(6):1297-318.

PMID:
18172930
[PubMed - indexed for MEDLINE]
17.

Predicting the phenotypic effects of non-synonymous single nucleotide polymorphisms based on support vector machines.

Tian J, Wu N, Guo X, Guo J, Zhang J, Fan Y.

BMC Bioinformatics. 2007 Nov 16;8:450.

PMID:
18005451
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

PicSNP: a browsable catalog of nonsynonymous single nucleotide polymorphisms in the human genome.

Chang H, Fujita T.

Biochem Biophys Res Commun. 2001 Sep 14;287(1):288-91.

PMID:
11549289
[PubMed - indexed for MEDLINE]
19.

Phenotype prediction of deleterious nonsynonymous single nucleotide polymorphisms in human alcohol metabolism-related genes: a bioinformatics study.

Wang LL, Yang AK, Li Y, Liu JP, Zhou SF.

Alcohol. 2010 Aug;44(5):425-38. doi: 10.1016/j.alcohol.2010.05.009. Epub 2010 Jun 18.

PMID:
20804942
[PubMed - indexed for MEDLINE]
20.

Statistical geometry approach to the study of functional effects of human nonsynonymous SNPs.

Barenboim M, Jamison DC, Vaisman II.

Hum Mutat. 2005 Nov;26(5):471-6.

PMID:
16200641
[PubMed - indexed for MEDLINE]

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