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Similar articles for PubMed (Select 12785839)

1.

NMR studies of DNA single strands and DNA:RNA hybrids with and without 1-propynylation at C5 of oligopyrimidines.

Znosko BM, Barnes TW 3rd, Krugh TR, Turner DH.

J Am Chem Soc. 2003 May 21;125(20):6090-7.

PMID:
12785839
2.
3.

C5-(1-propynyl)-2'-deoxy-pyrimidines enhance mismatch penalties of DNA:RNA duplex formation.

Barnes TW 3rd, Turner DH.

Biochemistry. 2001 Oct 23;40(42):12738-45.

PMID:
11601999
4.

Determining the origin of the stabilization of DNA by 5-aminopropynylation of pyrimidines.

Booth J, Brown T, Vadhia SJ, Lack O, Cummins WJ, Trent JO, Lane AN.

Biochemistry. 2005 Mar 29;44(12):4710-9.

PMID:
15779897
5.

The DNA strand in DNA.RNA hybrid duplexes is neither B-form nor A-form in solution.

Salazar M, Fedoroff OY, Miller JM, Ribeiro NS, Reid BR.

Biochemistry. 1993 Apr 27;32(16):4207-15.

PMID:
7682844
6.

Structure and stability of the consecutive stereoregulated chiral phosphorothioate DNA duplex.

Kanaori K, Tamura Y, Wada T, Nishi M, Kanehara H, Morii T, Tajima K, Makino K.

Biochemistry. 1999 Dec 7;38(49):16058-66.

PMID:
10587428
7.

NMR studies of fully modified locked nucleic acid (LNA) hybrids: solution structure of an LNA:RNA hybrid and characterization of an LNA:DNA hybrid.

Nielsen KE, Rasmussen J, Kumar R, Wengel J, Jacobsen JP, Petersen M.

Bioconjug Chem. 2004 May-Jun;15(3):449-57.

PMID:
15149171
8.

The 5-Me of thyminyl (T) interaction with the neighboring nucleobases dictate the relative stability of isosequential DNA-RNA hybrid duplexes.

Chatterjee S, Pathmasiri W, Chattopadhyaya J.

Org Biomol Chem. 2005 Nov 7;3(21):3911-5. Epub 2005 Sep 29.

PMID:
16240008
9.

2-Aminopurine: a probe of structural dynamics and charge transfer in DNA and DNA:RNA hybrids.

O'Neill MA, Barton JK.

J Am Chem Soc. 2002 Nov 6;124(44):13053-66.

PMID:
12405832
10.

The solution structure of a DNA*RNA duplex containing 5-propynyl U and C; comparison with 5-Me modifications.

Gyi JI, Gao D, Conn GL, Trent JO, Brown T, Lane AN.

Nucleic Acids Res. 2003 May 15;31(10):2683-93.

11.

Solution conformation of an RNA--DNA hybrid duplex containing a pyrimidine RNA strand and a purine DNA strand.

Hantz E, Larue V, Ladam P, Le Moyec L, Gouyette C, Huynh Dinh T.

Int J Biol Macromol. 2001 Apr 12;28(4):273-84.

PMID:
11311717
13.

Solution Strucutres of DNA duplexes containing a DNA x RNA hybrid region, d(GG)r(AGAU)d(GAC) x d(GTCATCTCC) and d(GGAGA)r(UGAC) x d(GTCATCTCC).

Nishizaki T, Iwai S, Ohkubo T, Kojima C, Nakamura H, Kyogoku Y, Ohtsuka E.

Biochemistry. 1996 Apr 2;35(13):4016-25.

PMID:
8672435
14.

Locked nucleic acid (LNA) recognition of RNA: NMR solution structures of LNA:RNA hybrids.

Petersen M, Bondensgaard K, Wengel J, Jacobsen JP.

J Am Chem Soc. 2002 May 29;124(21):5974-82.

PMID:
12022830
15.

Thermodynamics-structure relationship of single mismatches in RNA/DNA duplexes.

Sugimoto N, Nakano M, Nakano S.

Biochemistry. 2000 Sep 19;39(37):11270-81.

PMID:
10985772
16.

Solution structure of an arabinonucleic acid (ANA)/RNA duplex in a chimeric hairpin: comparison with 2'-fluoro-ANA/RNA and DNA/RNA hybrids.

Denisov AY, Noronha AM, Wilds CJ, Trempe JF, Pon RT, Gehring K, Damha MJ.

Nucleic Acids Res. 2001 Nov 1;29(21):4284-93.

17.
18.

The solution structure of [d(CGC)r(aaa)d(TTTGCG)](2): hybrid junctions flanked by DNA duplexes.

Hsu ST, Chou MT, Cheng JW.

Nucleic Acids Res. 2000 Mar 15;28(6):1322-31.

19.

Recognition of RNA by amide modified backbone nucleic acids: molecular dynamics simulations of DNA-RNA hybrids in aqueous solution.

Nina M, Fonné-Pfister R, Beaudegnies R, Chekatt H, Jung PM, Murphy-Kessabi F, De Mesmaeker A, Wendeborn S.

J Am Chem Soc. 2005 Apr 27;127(16):6027-38.

PMID:
15839703
20.

Kinetic hybrid i-motifs: intercepting DNA with RNA to form a DNA(2)-RNA(2) i-motif.

Chakraborty S, Krishnan Y.

Biochimie. 2008 Jul;90(7):1088-95. doi: 10.1016/j.biochi.2008.02.022. Epub 2008 Mar 2.

PMID:
18358847
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