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Similar articles for PubMed (Select 11591638)


A clone-array pooled shotgun strategy for sequencing large genomes.

Cai WW, Chen R, Gibbs RA, Bradley A.

Genome Res. 2001 Oct;11(10):1619-23.


Assembling allopolyploid genomes: no longer formidable.

Ming R, Man Wai C.

Genome Biol. 2015 Jan 31;16:27. doi: 10.1186/s13059-015-0585-5.


Intersection of DNA Privacy and Whole-Genome Sequencing.

Hong C, Wang J, Xing C, Hwang TH, Park JY.

Clin Chem. 2015 Jul;61(7):900-2. doi: 10.1373/clinchem.2014.235499. Epub 2015 Feb 5. No abstract available.


Facile, high quality sequencing of bacterial genomes from small amounts of DNA.

Vuyisich M, Arefin A, Davenport K, Feng S, Gleasner C, McMurry K, Parson-Quintana B, Price J, Scholz M, Chain P.

Int J Genomics. 2014;2014:434575. doi: 10.1155/2014/434575. Epub 2014 Nov 13.


Unlocking the mystery of the hard-to-sequence phage genome: PaP1 methylome and bacterial immunity.

Lu S, Le S, Tan Y, Li M, Liu C, Zhang K, Huang J, Chen H, Rao X, Zhu J, Zou L, Ni Q, Li S, Wang J, Jin X, Hu Q, Yao X, Zhao X, Zhang L, Huang G, Hu F.

BMC Genomics. 2014 Sep 19;15:803. doi: 10.1186/1471-2164-15-803.


Genome Sequence of the Boron-Tolerant and -Requiring Bacterium Bacillus boroniphilus.

Cöl B, Ozkeserli Z, Kumar D, Ozdag H, Alakoç YD.

Genome Announc. 2014 Jan 2;2(1). pii: e00935-13. doi: 10.1128/genomeA.00935-13.


Non-overlapping Clone Pooling for High-Throughput Sequencing.

Kuroshu RM.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Jul 19. [Epub ahead of print]


'Shotgun DNA synthesis' for the high-throughput construction of large DNA molecules.

Kim H, Han H, Ahn J, Lee J, Cho N, Jang H, Kim H, Kwon S, Bang D.

Nucleic Acids Res. 2012 Oct;40(18):e140. doi: 10.1093/nar/gks546. Epub 2012 Jun 16.


A cost-effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation.

Jiang J, Li J, Kwan HS, Au CH, Wan Law PT, Li L, Kam KM, Lun Ling JM, Leung FC.

BMC Res Notes. 2012 Jan 31;5:80. doi: 10.1186/1756-0500-5-80.


Phenotype sequencing: identifying the genes that cause a phenotype directly from pooled sequencing of independent mutants.

Harper MA, Chen Z, Toy T, Machado IM, Nelson SF, Liao JC, Lee CJ.

PLoS One. 2011 Feb 18;6(2):e16517. doi: 10.1371/journal.pone.0016517.


Pig genome sequence--analysis and publication strategy.

Archibald AL, Bolund L, Churcher C, Fredholm M, Groenen MA, Harlizius B, Lee KT, Milan D, Rogers J, Rothschild MF, Uenishi H, Wang J, Schook LB; Swine Genome Sequencing Consortium.

BMC Genomics. 2010 Jul 19;11:438. doi: 10.1186/1471-2164-11-438.


Finishing genomes with limited resources: lessons from an ensemble of microbial genomes.

Nagarajan N, Cook C, Di Bonaventura M, Ge H, Richards A, Bishop-Lilly KA, DeSalle R, Read TD, Pop M.

BMC Genomics. 2010 Apr 16;11:242. doi: 10.1186/1471-2164-11-242.


Integrating sequencing technologies in personal genomics: optimal low cost reconstruction of structural variants.

Du J, Bjornson RD, Zhang ZD, Kong Y, Snyder M, Gerstein MB.

PLoS Comput Biol. 2009 Jul;5(7):e1000432. doi: 10.1371/journal.pcbi.1000432. Epub 2009 Jul 10.


The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies.

Bekel T, Henckel K, Küster H, Meyer F, Mittard Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, Goesmann A.

J Biotechnol. 2009 Mar 10;140(1-2):3-12.


A multiway analysis for identifying high integrity bovine BACs.

Ratnakumar A, Barris W, McWilliam S, Brauning R, McEwan JC, Snelling WM, Dalrymple BP.

BMC Genomics. 2009 Jan 23;10:46. doi: 10.1186/1471-2164-10-46.


Preparation of a phage DNA fragment library for whole genome shotgun sequencing.

Summer EJ.

Methods Mol Biol. 2009;502:27-46. doi: 10.1007/978-1-60327-565-1_4.


Amniote phylogenomics: testing evolutionary hypotheses with BAC library scanning and targeted clone analysis of large-scale DNA sequences from reptiles.

Shedlock AM, Janes DE, Edwards SV.

Methods Mol Biol. 2008;422:91-117. doi: 10.1007/978-1-59745-581-7_7.


Construction of high-resolution comparative maps in mammals using BAC-end sequences.

Larkin DM, Lewin HA.

Methods Mol Biol. 2008;422:79-90. doi: 10.1007/978-1-59745-581-7_6.

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