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Results: 1 to 20 of 38

PubMed (Weighted) Links for Nucleotide (Select 208228)

1.

In vivo mutagenicity of arsenite in the livers of gpt delta transgenic mice.

Takumi S, Aoki Y, Sano T, Suzuki T, Nohmi T, Nohara K.

Mutat Res Genet Toxicol Environ Mutagen. 2014 Jan 15;760:42-7. doi: 10.1016/j.mrgentox.2013.12.001. Epub 2013 Dec 10.

PMID:
24333349
2.

Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2.

Ahmed SA, Awosika J, Baldwin C, Bishop-Lilly KA, Biswas B, Broomall S, Chain PS, Chertkov O, Chokoshvili O, Coyne S, Davenport K, Detter JC, Dorman W, Erkkila TH, Folster JP, Frey KG, George M, Gleasner C, Henry M, Hill KK, Hubbard K, Insalaco J, Johnson S, Kitzmiller A, Krepps M, Lo CC, Luu T, McNew LA, Minogue T, Munk CA, Osborne B, Patel M, Reitenga KG, Rosenzweig CN, Shea A, Shen X, Strockbine N, Tarr C, Teshima H, van Gieson E, Verratti K, Wolcott M, Xie G, Sozhamannan S, Gibbons HS; Threat Characterization Consortium.

PLoS One. 2012;7(11):e48228. doi: 10.1371/journal.pone.0048228. Epub 2012 Nov 1.

3.

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths.

Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, Bidet P, Bingen E, Bonacorsi S, Bouchier C, Bouvet O, Calteau A, Chiapello H, Clermont O, Cruveiller S, Danchin A, Diard M, Dossat C, Karoui ME, Frapy E, Garry L, Ghigo JM, Gilles AM, Johnson J, Le Bouguénec C, Lescat M, Mangenot S, Martinez-Jéhanne V, Matic I, Nassif X, Oztas S, Petit MA, Pichon C, Rouy Z, Ruf CS, Schneider D, Tourret J, Vacherie B, Vallenet D, Médigue C, Rocha EP, Denamur E.

PLoS Genet. 2009 Jan;5(1):e1000344. doi: 10.1371/journal.pgen.1000344. Epub 2009 Jan 23.

4.

Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium.

Bergholz TM, Wick LM, Qi W, Riordan JT, Ouellette LM, Whittam TS.

BMC Microbiol. 2007 Oct 29;7:97.

5.

A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis.

Lasserre JP, Beyne E, Pyndiah S, Lapaillerie D, Claverol S, Bonneu M.

Electrophoresis. 2006 Aug;27(16):3306-21.

PMID:
16858726
6.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.

Hayashi K, Morooka N, Yamamoto Y, Fujita K, Isono K, Choi S, Ohtsubo E, Baba T, Wanner BL, Mori H, Horiuchi T.

Mol Syst Biol. 2006;2:2006.0007. Epub 2006 Feb 21.

7.

Large-scale identification of protein-protein interaction of Escherichia coli K-12.

Arifuzzaman M, Maeda M, Itoh A, Nishikata K, Takita C, Saito R, Ara T, Nakahigashi K, Huang HC, Hirai A, Tsuzuki K, Nakamura S, Altaf-Ul-Amin M, Oshima T, Baba T, Yamamoto N, Kawamura T, Ioka-Nakamichi T, Kitagawa M, Tomita M, Kanaya S, Wada C, Mori H.

Genome Res. 2006 May;16(5):686-91. Epub 2006 Apr 10.

8.

Escherichia coli K-12: a cooperatively developed annotation snapshot--2005.

Riley M, Abe T, Arnaud MB, Berlyn MK, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T, Mori H, Perna NT, Plunkett G 3rd, Rudd KE, Serres MH, Thomas GH, Thomson NR, Wishart D, Wanner BL.

Nucleic Acids Res. 2006 Jan 5;34(1):1-9. Print 2006.

9.

Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery.

Yang F, Yang J, Zhang X, Chen L, Jiang Y, Yan Y, Tang X, Wang J, Xiong Z, Dong J, Xue Y, Zhu Y, Xu X, Sun L, Chen S, Nie H, Peng J, Xu J, Wang Y, Yuan Z, Wen Y, Yao Z, Shen Y, Qiang B, Hou Y, Yu J, Jin Q.

Nucleic Acids Res. 2005 Nov 7;33(19):6445-58. Print 2005.

10.

Genomic changes arising in long-term stab cultures of Escherichia coli.

Faure D, Frederick R, Włoch D, Portier P, Blot M, Adams J.

J Bacteriol. 2004 Oct;186(19):6437-42.

11.

Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157.

Jin Q, Yuan Z, Xu J, Wang Y, Shen Y, Lu W, Wang J, Liu H, Yang J, Yang F, Zhang X, Zhang J, Yang G, Wu H, Qu D, Dong J, Sun L, Xue Y, Zhao A, Gao Y, Zhu J, Kan B, Ding K, Chen S, Cheng H, Yao Z, He B, Chen R, Ma D, Qiang B, Wen Y, Hou Y, Yu J.

Nucleic Acids Res. 2002 Oct 15;30(20):4432-41.

12.

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

Hayashi T, Makino K, Ohnishi M, Kurokawa K, Ishii K, Yokoyama K, Han CG, Ohtsubo E, Nakayama K, Murata T, Tanaka M, Tobe T, Iida T, Takami H, Honda T, Sasakawa C, Ogasawara N, Yasunaga T, Kuhara S, Shiba T, Hattori M, Shinagawa H.

DNA Res. 2001 Feb 28;8(1):11-22. Erratum in: DNA Res 2001 Apr 27;8(2):96.

13.

Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak.

Yokoyama K, Makino K, Kubota Y, Watanabe M, Kimura S, Yutsudo CH, Kurokawa K, Ishii K, Hattori M, Tatsuno I, Abe H, Yoh M, Iida T, Ohnishi M, Hayashi T, Yasunaga T, Honda T, Sasakawa C, Shinagawa H.

Gene. 2000 Nov 27;258(1-2):127-39.

PMID:
11111050
14.

Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655.

Ohnishi M, Murata T, Nakayama K, Kuhara S, Hattori M, Kurokawa K, Yasunaga T, Yokoyama K, Makino K, Shinagawa H, Hayashi T.

Syst Appl Microbiol. 2000 Oct;23(3):315-24.

PMID:
11108008
15.

Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak.

Makino K, Yokoyama K, Kubota Y, Yutsudo CH, Kimura S, Kurokawa K, Ishii K, Hattori M, Tatsuno I, Abe H, Iida T, Yamamoto K, Onishi M, Hayashi T, Yasunaga T, Honda T, Sasakawa C, Shinagawa H.

Genes Genet Syst. 1999 Oct;74(5):227-39.

16.

Structures of free and complexed forms of Escherichia coli xanthine-guanine phosphoribosyltransferase.

Vos S, Parry RJ, Burns MR, de Jersey J, Martin JL.

J Mol Biol. 1998 Oct 2;282(4):875-89.

PMID:
9743633
17.

The complete genome sequence of Escherichia coli K-12.

Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y.

Science. 1997 Sep 5;277(5331):1453-62.

PMID:
9278503
18.

Crystal structure of Escherichia coli xanthine phosphoribosyltransferase.

Vos S, de Jersey J, Martin JL.

Biochemistry. 1997 Apr 8;36(14):4125-34.

PMID:
9100006
19.
20.
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