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Results: 1 to 20 of 66

1.

The crystal structure of Pyrococcus abyssi tRNA (uracil-54, C5)-methyltransferase provides insights into its tRNA specificity.

Walbott H, Leulliot N, Grosjean H, Golinelli-Pimpaneau B.

Nucleic Acids Res. 2008 Sep;36(15):4929-40. doi: 10.1093/nar/gkn437. Epub 2008 Jul 24.

PMID:
18653523
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Structure of a TrmA-RNA complex: A consensus RNA fold contributes to substrate selectivity and catalysis in m5U methyltransferases.

Alian A, Lee TT, Griner SL, Stroud RM, Finer-Moore J.

Proc Natl Acad Sci U S A. 2008 May 13;105(19):6876-81. doi: 10.1073/pnas.0802247105. Epub 2008 May 1.

PMID:
18451029
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Dissecting protein-RNA recognition sites.

Bahadur RP, Zacharias M, Janin J.

Nucleic Acids Res. 2008 May;36(8):2705-16. doi: 10.1093/nar/gkn102. Epub 2008 Mar 19.

PMID:
18353859
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Predicting RNA-binding sites from the protein structure based on electrostatics, evolution and geometry.

Chen YC, Lim C.

Nucleic Acids Res. 2008 Mar;36(5):e29. doi: 10.1093/nar/gkn008. Epub 2008 Feb 14.

PMID:
18276647
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Structure of the yeast tRNA m7G methylation complex.

Leulliot N, Chaillet M, Durand D, Ulryck N, Blondeau K, van Tilbeurgh H.

Structure. 2008 Jan;16(1):52-61. doi: 10.1016/j.str.2007.10.025.

PMID:
18184583
[PubMed - indexed for MEDLINE]
Free Article
6.

Protein crystallography for non-crystallographers, or how to get the best (but not more) from published macromolecular structures.

Wlodawer A, Minor W, Dauter Z, Jaskolski M.

FEBS J. 2008 Jan;275(1):1-21. Epub 2007 Nov 23. Review.

PMID:
18034855
[PubMed - indexed for MEDLINE]
7.
8.

Evaluating conformational changes in protein structures binding RNA.

Ellis JJ, Jones S.

Proteins. 2008 Mar;70(4):1518-26.

PMID:
17910059
[PubMed - indexed for MEDLINE]
9.

The PUA domain - a structural and functional overview.

Pérez-Arellano I, Gallego J, Cervera J.

FEBS J. 2007 Oct;274(19):4972-84. Epub 2007 Sep 4. Review.

PMID:
17803682
[PubMed - indexed for MEDLINE]
10.

Indirect readout of tRNA for aminoacylation.

Perona JJ, Hou YM.

Biochemistry. 2007 Sep 18;46(37):10419-32. Epub 2007 Aug 24. Review.

PMID:
17718520
[PubMed - indexed for MEDLINE]
11.

Inference of macromolecular assemblies from crystalline state.

Krissinel E, Henrick K.

J Mol Biol. 2007 Sep 21;372(3):774-97. Epub 2007 May 13.

PMID:
17681537
[PubMed - indexed for MEDLINE]
12.

How U38, 39, and 40 of many tRNAs become the targets for pseudouridylation by TruA.

Hur S, Stroud RM.

Mol Cell. 2007 Apr 27;26(2):189-203.

PMID:
17466622
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure.

Hoang C, Chen J, Vizthum CA, Kandel JM, Hamilton CS, Mueller EG, Ferré-D'Amaré AR.

Mol Cell. 2006 Nov 17;24(4):535-45.

PMID:
17188032
[PubMed - indexed for MEDLINE]
Free Article
14.

Protein-RNA interactions: structural analysis and functional classes.

Ellis JJ, Broom M, Jones S.

Proteins. 2007 Mar 1;66(4):903-11.

PMID:
17186525
[PubMed - indexed for MEDLINE]
15.

Pseudouridine synthases.

Hamma T, Ferré-D'Amaré AR.

Chem Biol. 2006 Nov;13(11):1125-35. Review.

PMID:
17113994
[PubMed - indexed for MEDLINE]
Free Article
16.

Mechanistic investigations of the pseudouridine synthase RluA using RNA containing 5-fluorouridine.

Hamilton CS, Greco TM, Vizthum CA, Ginter JM, Johnston MV, Mueller EG.

Biochemistry. 2006 Oct 3;45(39):12029-38.

PMID:
17002302
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Protein-RNA interactions: exploring binding patterns with a three-dimensional superposition analysis of high resolution structures.

Morozova N, Allers J, Myers J, Shamoo Y.

Bioinformatics. 2006 Nov 15;22(22):2746-52. Epub 2006 Sep 11.

PMID:
16966360
[PubMed - indexed for MEDLINE]
Free Article
18.

Structure of the 70S ribosome complexed with mRNA and tRNA.

Selmer M, Dunham CM, Murphy FV 4th, Weixlbaumer A, Petry S, Kelley AC, Weir JR, Ramakrishnan V.

Science. 2006 Sep 29;313(5795):1935-42. Epub 2006 Sep 7.

PMID:
16959973
[PubMed - indexed for MEDLINE]
Free Article
19.

Snapshots of tRNA sulphuration via an adenylated intermediate.

Numata T, Ikeuchi Y, Fukai S, Suzuki T, Nureki O.

Nature. 2006 Jul 27;442(7101):419-24.

PMID:
16871210
[PubMed - indexed for MEDLINE]
20.

Prediction of RNA binding sites in proteins from amino acid sequence.

Terribilini M, Lee JH, Yan C, Jernigan RL, Honavar V, Dobbs D.

RNA. 2006 Aug;12(8):1450-62. Epub 2006 Jun 21.

PMID:
16790841
[PubMed - indexed for MEDLINE]
Free PMC Article

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