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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2000 1
2001 2
2003 4
2004 2
2005 1
2006 1
2008 2
2010 1
2011 5
2012 2
2013 7
2014 7
2015 5
2016 11
2017 5
2018 7
2019 3
2020 5
2021 9
2022 6
2023 5
2024 1

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88 results

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Page 1
Advances in the clinical use of metaproteomics.
Wolf M, Schallert K, Knipper L, Sickmann A, Sczyrba A, Benndorf D, Heyer R. Wolf M, et al. Among authors: sczyrba a. Expert Rev Proteomics. 2023 Apr-Jun;20(4-6):71-86. doi: 10.1080/14789450.2023.2215440. Epub 2023 May 30. Expert Rev Proteomics. 2023. PMID: 37249060 Review.
Critical Assessment of Metagenome Interpretation: the second round of challenges.
Meyer F, Fritz A, Deng ZL, Koslicki D, Lesker TR, Gurevich A, Robertson G, Alser M, Antipov D, Beghini F, Bertrand D, Brito JJ, Brown CT, Buchmann J, Buluç A, Chen B, Chikhi R, Clausen PTLC, Cristian A, Dabrowski PW, Darling AE, Egan R, Eskin E, Georganas E, Goltsman E, Gray MA, Hansen LH, Hofmeyr S, Huang P, Irber L, Jia H, Jørgensen TS, Kieser SD, Klemetsen T, Kola A, Kolmogorov M, Korobeynikov A, Kwan J, LaPierre N, Lemaitre C, Li C, Limasset A, Malcher-Miranda F, Mangul S, Marcelino VR, Marchet C, Marijon P, Meleshko D, Mende DR, Milanese A, Nagarajan N, Nissen J, Nurk S, Oliker L, Paoli L, Peterlongo P, Piro VC, Porter JS, Rasmussen S, Rees ER, Reinert K, Renard B, Robertsen EM, Rosen GL, Ruscheweyh HJ, Sarwal V, Segata N, Seiler E, Shi L, Sun F, Sunagawa S, Sørensen SJ, Thomas A, Tong C, Trajkovski M, Tremblay J, Uritskiy G, Vicedomini R, Wang Z, Wang Z, Wang Z, Warren A, Willassen NP, Yelick K, You R, Zeller G, Zhao Z, Zhu S, Zhu J, Garrido-Oter R, Gastmeier P, Hacquard S, Häußler S, Khaledi A, Maechler F, Mesny F, Radutoiu S, Schulze-Lefert P, Smit N, Strowig T, Bremges A, Sczyrba A, McHardy AC. Meyer F, et al. Among authors: sczyrba a. Nat Methods. 2022 Apr;19(4):429-440. doi: 10.1038/s41592-022-01431-4. Epub 2022 Apr 8. Nat Methods. 2022. PMID: 35396482 Free PMC article.
Adaptation of a microbial community to demand-oriented biological methanation.
Khesali Aghtaei H, Püttker S, Maus I, Heyer R, Huang L, Sczyrba A, Reichl U, Benndorf D. Khesali Aghtaei H, et al. Among authors: sczyrba a. Biotechnol Biofuels Bioprod. 2022 Nov 16;15(1):125. doi: 10.1186/s13068-022-02207-w. Biotechnol Biofuels Bioprod. 2022. PMID: 36384582 Free PMC article.
Bioinformatics for NGS-based metagenomics and the application to biogas research.
Jünemann S, Kleinbölting N, Jaenicke S, Henke C, Hassa J, Nelkner J, Stolze Y, Albaum SP, Schlüter A, Goesmann A, Sczyrba A, Stoye J. Jünemann S, et al. Among authors: sczyrba a. J Biotechnol. 2017 Nov 10;261:10-23. doi: 10.1016/j.jbiotec.2017.08.012. Epub 2017 Aug 18. J Biotechnol. 2017. PMID: 28823476 Free article. Review.
Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows.
Van Den Bossche T, Kunath BJ, Schallert K, Schäpe SS, Abraham PE, Armengaud J, Arntzen MØ, Bassignani A, Benndorf D, Fuchs S, Giannone RJ, Griffin TJ, Hagen LH, Halder R, Henry C, Hettich RL, Heyer R, Jagtap P, Jehmlich N, Jensen M, Juste C, Kleiner M, Langella O, Lehmann T, Leith E, May P, Mesuere B, Miotello G, Peters SL, Pible O, Queiros PT, Reichl U, Renard BY, Schiebenhoefer H, Sczyrba A, Tanca A, Trappe K, Trezzi JP, Uzzau S, Verschaffelt P, von Bergen M, Wilmes P, Wolf M, Martens L, Muth T. Van Den Bossche T, et al. Among authors: sczyrba a. Nat Commun. 2021 Dec 15;12(1):7305. doi: 10.1038/s41467-021-27542-8. Nat Commun. 2021. PMID: 34911965 Free PMC article.
CAMISIM: simulating metagenomes and microbial communities.
Fritz A, Hofmann P, Majda S, Dahms E, Dröge J, Fiedler J, Lesker TR, Belmann P, DeMaere MZ, Darling AE, Sczyrba A, Bremges A, McHardy AC. Fritz A, et al. Among authors: sczyrba a. Microbiome. 2019 Feb 8;7(1):17. doi: 10.1186/s40168-019-0633-6. Microbiome. 2019. PMID: 30736849 Free PMC article.
de.NBI Cloud federation through ELIXIR AAI.
Belmann P, Fischer B, Krüger J, Procházka M, Rasche H, Prinz M, Hanussek M, Lang M, Bartusch F, Gläßle B, Krüger J, Pühler A, Sczyrba A. Belmann P, et al. Among authors: sczyrba a. F1000Res. 2019 Jun 10;8:842. doi: 10.12688/f1000research.19013.1. eCollection 2019. F1000Res. 2019. PMID: 31354949 Free PMC article.
AMBER: Assessment of Metagenome BinnERs.
Meyer F, Hofmann P, Belmann P, Garrido-Oter R, Fritz A, Sczyrba A, McHardy AC. Meyer F, et al. Among authors: sczyrba a. Gigascience. 2018 Jun 1;7(6):giy069. doi: 10.1093/gigascience/giy069. Gigascience. 2018. PMID: 29893851 Free PMC article.
Haploflow: Strain-resolved de novo assembly of viral genomes.
Fritz A, Bremges A, Deng ZL, Lesker TR, Götting J, Ganzenmüller T, Sczyrba A, Dilthey A, Klawonn F, McHardy AC. Fritz A, et al. Among authors: sczyrba a. bioRxiv [Preprint]. 2021 Jan 26:2021.01.25.428049. doi: 10.1101/2021.01.25.428049. bioRxiv. 2021. PMID: 33532769 Free PMC article. Updated. Preprint.
88 results