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Items: 1 to 20 of 127

1.

Investigating the Relatedness of Enteroinvasive Escherichia coli to Other E. coli and Shigella Isolates by Using Comparative Genomics.

Hazen TH, Leonard SR, Lampel KA, Lacher DW, Maurelli AT, Rasko DA.

Infect Immun. 2016 Jul 21;84(8):2362-71. doi: 10.1128/IAI.00350-16. Print 2016 Aug.

PMID:
27271741
2.

Hybrid Shiga Toxin-Producing and Enterotoxigenic Escherichia sp. Cryptic Lineage 1 Strain 7v Harbors a Hybrid Plasmid.

Leonard SR, Mammel MK, Rasko DA, Lacher DW.

Appl Environ Microbiol. 2016 Jun 30;82(14):4309-19. doi: 10.1128/AEM.01129-16. Print 2016 Jul 15.

PMID:
27208138
3.

Overcoming Enterotoxigenic Escherichia coli Pathogen Diversity: Translational Molecular Approaches to Inform Vaccine Design.

Fleckenstein JM, Rasko DA.

Methods Mol Biol. 2016;1403:363-83. doi: 10.1007/978-1-4939-3387-7_19.

PMID:
27076141
4.

Genome diversity of Shigella boydii.

Kania DA, Hazen TH, Hossain A, Nataro JP, Rasko DA.

Pathog Dis. 2016 Jun;74(4). pii: ftw027. doi: 10.1093/femspd/ftw027. Epub 2016 Apr 6.

PMID:
27056949
5.

Diarrhea, bacteremia and multiorgan dysfunction due to an extraintestinal pathogenic Escherichia coli strain with enteropathogenic E. coli genes.

Kessler R, Nisa S, Hazen TH, Horneman A, Amoroso A, Rasko DA, Donnenberg MS.

Pathog Dis. 2015 Nov;73(8):ftv076. doi: 10.1093/femspd/ftv076. Epub 2015 Sep 26.

6.

Comparative Genomics Provides Insight into the Diversity of the Attaching and Effacing Escherichia coli Virulence Plasmids.

Hazen TH, Kaper JB, Nataro JP, Rasko DA.

Infect Immun. 2015 Oct;83(10):4103-17. doi: 10.1128/IAI.00769-15. Epub 2015 Aug 3.

7.

Phylogenetically typing bacterial strains from partial SNP genotypes observed from direct sequencing of clinical specimen metagenomic data.

Sahl JW, Schupp JM, Rasko DA, Colman RE, Foster JT, Keim P.

Genome Med. 2015 Jun 9;7(1):52. doi: 10.1186/s13073-015-0176-9. eCollection 2015.

8.

RNA-Seq analysis of isolate- and growth phase-specific differences in the global transcriptomes of enteropathogenic Escherichia coli prototype isolates.

Hazen TH, Daugherty SC, Shetty A, Mahurkar AA, White O, Kaper JB, Rasko DA.

Front Microbiol. 2015 Jun 12;6:569. doi: 10.3389/fmicb.2015.00569. eCollection 2015.

9.

EHEC Genomics: Past, Present, and Future.

Sadiq SM, Hazen TH, Rasko DA, Eppinger M.

Microbiol Spectr. 2014 Aug;2(4):EHEC-0020-2013. doi: 10.1128/microbiolspec.EHEC-0020-2013. Review.

PMID:
26104203
10.

Examination of the Enterotoxigenic Escherichia coli Population Structure during Human Infection.

Sahl JW, Sistrunk JR, Fraser CM, Hine E, Baby N, Begum Y, Luo Q, Sheikh A, Qadri F, Fleckenstein JM, Rasko DA.

MBio. 2015 Jun 9;6(3):e00501. doi: 10.1128/mBio.00501-15.

11.

Bacterial Factors Associated with Lethal Outcome of Enteropathogenic Escherichia coli Infection: Genomic Case-Control Studies.

Donnenberg MS, Hazen TH, Farag TH, Panchalingam S, Antonio M, Hossain A, Mandomando I, Ochieng JB, Ramamurthy T, Tamboura B, Zaidi A, Levine MM, Kotloff K, Rasko DA, Nataro JP.

PLoS Negl Trop Dis. 2015 May 15;9(5):e0003791. doi: 10.1371/journal.pntd.0003791. eCollection 2015 May.

12.

Characterization of the pathogenome and phylogenomic classification of enteropathogenic Escherichia coli of the O157:non-H7 serotypes.

Sanjar F, Rusconi B, Hazen TH, Koenig SS, Mammel MK, Feng PC, Rasko DA, Eppinger M.

Pathog Dis. 2015 Jul;73(5). pii: ftv033. doi: 10.1093/femspd/ftv033. Epub 2015 May 10.

13.

Insights into the environmental reservoir of pathogenic Vibrio parahaemolyticus using comparative genomics.

Hazen TH, Lafon PC, Garrett NM, Lowe TM, Silberger DJ, Rowe LA, Frace M, Parsons MB, Bopp CA, Rasko DA, Sobecky PA.

Front Microbiol. 2015 Mar 24;6:204. doi: 10.3389/fmicb.2015.00204. eCollection 2015.

14.

Conservation and immunogenicity of novel antigens in diverse isolates of enterotoxigenic Escherichia coli.

Luo Q, Qadri F, Kansal R, Rasko DA, Sheikh A, Fleckenstein JM.

PLoS Negl Trop Dis. 2015 Jan 28;9(1):e0003446. doi: 10.1371/journal.pntd.0003446. eCollection 2015 Jan. Erratum in: PLoS Negl Trop Dis. 2015 Jun;9(6):e0003858.

15.

Blocking yersiniabactin import attenuates extraintestinal pathogenic Escherichia coli in cystitis and pyelonephritis and represents a novel target to prevent urinary tract infection.

Brumbaugh AR, Smith SN, Subashchandrabose S, Himpsl SD, Hazen TH, Rasko DA, Mobley HL.

Infect Immun. 2015 Apr;83(4):1443-50. doi: 10.1128/IAI.02904-14. Epub 2015 Jan 26.

16.

Defining the phylogenomics of Shigella species: a pathway to diagnostics.

Sahl JW, Morris CR, Emberger J, Fraser CM, Ochieng JB, Juma J, Fields B, Breiman RF, Gilmour M, Nataro JP, Rasko DA.

J Clin Microbiol. 2015 Mar;53(3):951-60. doi: 10.1128/JCM.03527-14. Epub 2015 Jan 14.

17.

Host-specific induction of Escherichia coli fitness genes during human urinary tract infection.

Subashchandrabose S, Hazen TH, Brumbaugh AR, Himpsl SD, Smith SN, Ernst RD, Rasko DA, Mobley HL.

Proc Natl Acad Sci U S A. 2014 Dec 23;111(51):18327-32. doi: 10.1073/pnas.1415959112. Epub 2014 Dec 8.

18.

QseC inhibitors as an antivirulence approach for Gram-negative pathogens.

Curtis MM, Russell R, Moreira CG, Adebesin AM, Wang C, Williams NS, Taussig R, Stewart D, Zimmern P, Lu B, Prasad RN, Zhu C, Rasko DA, Huntley JF, Falck JR, Sperandio V.

MBio. 2014 Nov 11;5(6):e02165. doi: 10.1128/mBio.02165-14.

19.

Identification of enterotoxigenic Escherichia coli (ETEC) clades with long-term global distribution.

von Mentzer A, Connor TR, Wieler LH, Semmler T, Iguchi A, Thomson NR, Rasko DA, Joffre E, Corander J, Pickard D, Wiklund G, Svennerholm AM, Sjöling Å, Dougan G.

Nat Genet. 2014 Dec;46(12):1321-6. doi: 10.1038/ng.3145. Epub 2014 Nov 10.

PMID:
25383970
20.

Circleator: flexible circular visualization of genome-associated data with BioPerl and SVG.

Crabtree J, Agrawal S, Mahurkar A, Myers GS, Rasko DA, White O.

Bioinformatics. 2014 Nov 1;30(21):3125-7. doi: 10.1093/bioinformatics/btu505. Epub 2014 Jul 29.

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