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Proteomic analyses of nucleoid-associated proteins in Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilis, and Staphylococcus aureus.
Ohniwa RL, Ushijima Y, Saito S, Morikawa K. Ohniwa RL, et al. PLoS One. 2011 Apr 26;6(4):e19172. doi: 10.1371/journal.pone.0019172. PLoS One. 2011. PMID: 21541338 Free PMC article.
BACKGROUND: The bacterial nucleoid contains several hundred kinds of nucleoid-associated proteins (NAPs), which play critical roles in genome functions such as transcription and replication. Several NAPs, such as Hu and H-NS in Escherichia coli, …
BACKGROUND: The bacterial nucleoid contains several hundred kinds of nucleoid-associated proteins (NAPs), which play cr …
Limited proteolysis of mycobacterial DNA-binding protein 1 with an extended, lysine-rich, intrinsically disordered region to unveil posttranslational modifications.
Yoshida Y, Nishiyama A, Suameitria Dewi DNS, Yamazaki T, Yokoyama A, Kobayashi D, Kondo H, Ozeki Y, Matsumoto S. Yoshida Y, et al. Biochem Biophys Res Commun. 2023 Nov 12;681:111-119. doi: 10.1016/j.bbrc.2023.09.028. Epub 2023 Sep 20. Biochem Biophys Res Commun. 2023. PMID: 37774568
However, the low sequence complexity and the presence of short lysine-rich repeats in the regions have hindered the accurate determination of types and locations of PTMs using conventional proteomic procedures. We described a limited proteolysis protocol using trypsin to …
However, the low sequence complexity and the presence of short lysine-rich repeats in the regions have hindered the accurate determination o …