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2013 2
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2018 1
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Venlafaxine's therapeutic reference range in the treatment of depression revised: a systematic review and meta-analysis.
Lense XM, Hiemke C, Funk CSM, Havemann-Reinecke U, Hefner G, Menke A, Mössner R, Riemer TG, Scherf-Clavel M, Schoretsanitis G, Gründer G, Hart XM. Lense XM, et al. Among authors: funk csm. Psychopharmacology (Berl). 2024 Feb;241(2):275-289. doi: 10.1007/s00213-023-06484-7. Epub 2023 Oct 19. Psychopharmacology (Berl). 2024. PMID: 37857898 Free PMC article.
Long-term dataset on aquatic responses to concurrent climate change and recovery from acidification.
Leach TH, Winslow LA, Acker FW, Bloomfield JA, Boylen CW, Bukaveckas PA, Charles DF, Daniels RA, Driscoll CT, Eichler LW, Farrell JL, Funk CS, Goodrich CA, Michelena TM, Nierzwicki-Bauer SA, Roy KM, Shaw WH, Sutherland JW, Swinton MW, Winkler DA, Rose KC. Leach TH, et al. Among authors: funk cs. Sci Data. 2018 Apr 10;5:180059. doi: 10.1038/sdata.2018.59. Sci Data. 2018. PMID: 29633989 Free PMC article.
An expanded evaluation of protein function prediction methods shows an improvement in accuracy.
Jiang Y, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo da CE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SM, Martelli PL, Profiti G, Casadio R, Cao R, Zhong Z, Cheng J, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Törönen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Bkc D, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang H, Paccanaro A, Gillis J, Sedeño-Cortés AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong Q, Ning W, Zhou Y, Tian W, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SC, Del Pozo A, Fernández JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A… See abstract for full author list ➔ Jiang Y, et al. Among authors: funk cs. Genome Biol. 2016 Sep 7;17(1):184. doi: 10.1186/s13059-016-1037-6. Genome Biol. 2016. PMID: 27604469 Free PMC article.
A close look at protein function prediction evaluation protocols.
Kahanda I, Funk CS, Ullah F, Verspoor KM, Ben-Hur A. Kahanda I, et al. Among authors: funk cs. Gigascience. 2015 Sep 14;4:41. doi: 10.1186/s13742-015-0082-5. eCollection 2015. Gigascience. 2015. PMID: 26380075 Free PMC article.
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