Glucose Metabolism and Acetate Switch in Archaea: the Enzymes in Haloferax volcanii

J Bacteriol. 2021 Mar 23;203(8):e00690-20. doi: 10.1128/JB.00690-20. Print 2021 Mar 23.

Abstract

The halophilic archaeon Haloferax volcanii has been proposed to degrade glucose via the semiphosphorylative Entner-Doudoroff (spED) pathway. Following our previous studies on key enzymes of this pathway, we now focus on the characterization of enzymes involved in 3-phosphoglycerate conversion to pyruvate, in anaplerosis, and in acetyl coenzyme A (acetyl-CoA) formation from pyruvate. These enzymes include phosphoglycerate mutase, enolase, pyruvate kinase, phosphoenolpyruvate carboxylase, and pyruvate-ferredoxin oxidoreductase. The essential function of these enzymes were shown by transcript analyses and growth experiments with respective deletion mutants. Furthermore, we show that H. volcanii-during aerobic growth on glucose-excreted significant amounts of acetate, which was consumed in the stationary phase (acetate switch). The enzyme catalyzing the conversion of acetyl-CoA to acetate as part of the acetate overflow mechanism, an ADP-forming acetyl-CoA synthetase (ACD), was characterized. The functional involvement of ACD in acetate formation and of AMP-forming acetyl-CoA synthetases (ACSs) in activation of excreted acetate was proven by using respective deletion mutants. Together, the data provide a comprehensive analysis of enzymes of the spED pathway and of anaplerosis and report the first genetic evidence of the functional involvement of enzymes of the acetate switch in archaea.IMPORTANCE In this work, we provide a comprehensive analysis of glucose degradation via the semiphosphorylative Entner-Doudoroff pathway in the haloarchaeal model organism Haloferax volcanii The study includes transcriptional analyses, growth experiments with deletion mutants. and characterization of all enzymes involved in the conversion of 3-phosphoglycerate to acetyl coenzyme A (acetyl-CoA) and in anaplerosis. Phylogenetic analyses of several enzymes indicate various lateral gene transfer events from bacteria to haloarchaea. Furthermore, we analyzed the key players involved in the acetate switch, i.e., in the formation (overflow) and subsequent consumption of acetate during aerobic growth on glucose. Together, the data provide novel aspects of glucose degradation, anaplerosis, and acetate switch in H. volcanii and thus expand our understanding of the unusual sugar metabolism in archaea.

Keywords: ADP-forming acetyl-CoA synthetase; Haloferax volcanii; acetate switch; glucose degradation; phosphoenolpyruvate carboxylase; pyruvate-ferredoxin oxidoreductase; semiphosphorylative Entner-Doudoroff pathway.

MeSH terms

  • Acetate-CoA Ligase / genetics
  • Acetate-CoA Ligase / metabolism
  • Acetates / metabolism*
  • Acetyl Coenzyme A / metabolism
  • Archaeal Proteins / genetics
  • Archaeal Proteins / metabolism
  • Glucose / metabolism*
  • Haloferax volcanii / enzymology*
  • Haloferax volcanii / genetics
  • Haloferax volcanii / growth & development
  • Haloferax volcanii / metabolism
  • Phosphoenolpyruvate Carboxylase / genetics
  • Phosphoenolpyruvate Carboxylase / metabolism
  • Phosphoglycerate Mutase / genetics
  • Phosphoglycerate Mutase / metabolism
  • Phosphopyruvate Hydratase / genetics
  • Phosphopyruvate Hydratase / metabolism
  • Pyruvic Acid / metabolism

Substances

  • Acetates
  • Archaeal Proteins
  • Acetyl Coenzyme A
  • Pyruvic Acid
  • Phosphoenolpyruvate Carboxylase
  • Phosphopyruvate Hydratase
  • Phosphoglycerate Mutase
  • Acetate-CoA Ligase
  • Glucose