Human Artificial Chromosomes that Bypass Centromeric DNA

Cell. 2019 Jul 25;178(3):624-639.e19. doi: 10.1016/j.cell.2019.06.006.

Abstract

Recent breakthroughs with synthetic budding yeast chromosomes expedite the creation of synthetic mammalian chromosomes and genomes. Mammals, unlike budding yeast, depend on the histone H3 variant, CENP-A, to epigenetically specify the location of the centromere-the locus essential for chromosome segregation. Prior human artificial chromosomes (HACs) required large arrays of centromeric α-satellite repeats harboring binding sites for the DNA sequence-specific binding protein, CENP-B. We report the development of a type of HAC that functions independently of these constraints. Formed by an initial CENP-A nucleosome seeding strategy, a construct lacking repetitive centromeric DNA formed several self-sufficient HACs that showed no uptake of genomic DNA. In contrast to traditional α-satellite HAC formation, the non-repetitive construct can form functional HACs without CENP-B or initial CENP-A nucleosome seeding, revealing distinct paths to centromere formation for different DNA sequence types. Our developments streamline the construction and characterization of HACs to facilitate mammalian synthetic genome efforts.

Keywords: HAC; centromere; chromatin; epigenetics; histone; human artificial chromosome; kinetochore; mitosis; nucleosome; synthetic chromosome.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Cell Line, Tumor
  • Centromere / genetics
  • Centromere / metabolism*
  • Centromere Protein A / genetics
  • Centromere Protein A / metabolism
  • Centromere Protein B / deficiency
  • Centromere Protein B / genetics
  • Centromere Protein B / metabolism
  • Chromosomes, Artificial, Human / metabolism*
  • DNA, Satellite / metabolism*
  • Epigenesis, Genetic
  • Humans
  • Nucleosomes / chemistry
  • Nucleosomes / metabolism
  • Plasmids / genetics
  • Plasmids / metabolism

Substances

  • Centromere Protein A
  • Centromere Protein B
  • DNA, Satellite
  • Nucleosomes