New genomic characteristics of highly pathogenic porcine reproductive and respiratory syndrome viruses do not lead to significant changes in pathogenicity

Vet Microbiol. 2012 Aug 17;158(3-4):291-9. doi: 10.1016/j.vetmic.2012.02.036. Epub 2012 Apr 3.

Abstract

Highly pathogenic porcine reproductive and respiratory syndrome (HP-PRRS) initially emerged in China and currently prevails in other Asian countries as well, resulting in immense economic losses. HP-PRRS virus (HP-PRRSV) has undergone rapid evolution since its first recognition in 2006. To analyze the genomic and pathogenic characteristics of 2010 HP-PRRSV, we tested 919 clinical samples collected from China, Laos and Vietnam, sequenced 29 complete genomes of HP-PRRSV isolates, and determined the pathogenicity of seven HP-PRRS viruses isolated from 2006 to 2010. HP-PRRSV was detected from 45.2% (415/919) samples, while only 0.1% (1/919) was classical PRRSV, indicating that HP-PRRSV isolates with a unique discontinuous deletion of 30 amino acids (aa) in non-structural protein 2 (Nsp2) are still the predominant viruses. 2010 HP-PRRSV together with 2009 HP-PRRSV isolates form a new evolutionary branch based on phylogenetic analyses. The numbers of potential N-glycosylation sites are variable in major glycoprotein GP5 but are conserved in minor glycoproteins GP2, GP3 and GP4. Pathogenicity studies showed that HP-PRRS viruses isolated from 2006 to 2010 maintain similar level of high pathogenicity, which caused high fever (>41°C for at least four days), 100% morbidity, and 40-100% mortality in 4-10 weeks old pigs. Real time monitoring information from this study could help to understand the genetic and pathogenic evolution of HP-PRRSV and assist in the control of HP-PRRS in Asia.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Asia / epidemiology
  • Genome, Viral / genetics*
  • Genomics
  • Glycosylation
  • Molecular Sequence Data
  • Phylogeny
  • Porcine Reproductive and Respiratory Syndrome / epidemiology
  • Porcine Reproductive and Respiratory Syndrome / pathology
  • Porcine Reproductive and Respiratory Syndrome / virology*
  • Porcine respiratory and reproductive syndrome virus / classification
  • Porcine respiratory and reproductive syndrome virus / genetics*
  • Porcine respiratory and reproductive syndrome virus / pathogenicity*
  • Sequence Alignment
  • Sequence Deletion
  • Swine

Associated data

  • GENBANK/EF112445
  • GENBANK/FJ393459
  • GENBANK/FJ394029
  • GENBANK/FJ895329
  • GENBANK/JF268682
  • GENBANK/JQ663541
  • GENBANK/JQ663542
  • GENBANK/JQ663543
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  • GENBANK/JQ663545
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  • GENBANK/JQ663554
  • GENBANK/JQ663555
  • GENBANK/JQ663556
  • GENBANK/JQ663557
  • GENBANK/JQ663558
  • GENBANK/JQ663559
  • GENBANK/JQ663560
  • GENBANK/JQ663561
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  • GENBANK/JQ663567
  • GENBANK/JQ663568