Beta-edge interactions in a pentadecameric human antibody V kappa domain

J Mol Biol. 2007 Mar 30;367(3):603-8. doi: 10.1016/j.jmb.2006.10.093. Epub 2006 Nov 3.

Abstract

Antibodies are the archetypal molecules of the Ig-fold superfamily. Their highly conserved beta-sheet architecture has evolved to avoid aggregation by protecting edge strands. However, the crystal structure of a human V kappa domain described here, reveals an exposed beta-edge strand which mediates assembly of a helical pentadecameric oligomer. This edge strand is highly conserved in V kappa domains but is both shortened and capped by the use of two sequential trans-proline residues in V lambda domains. We suggest that the exposure of this beta-edge in V kappa domains may explain why light-chain deposition disease is mediated predominantly by kappa antibodies.

MeSH terms

  • Crystallography, X-Ray
  • Humans
  • Hydrogen Bonding
  • Immunoglobulin Variable Region / chemistry*
  • Immunoglobulin kappa-Chains / chemistry*
  • Models, Molecular
  • Protein Structure, Quaternary
  • Protein Structure, Secondary
  • Protein Structure, Tertiary

Substances

  • Immunoglobulin Variable Region
  • Immunoglobulin kappa-Chains