Complexes of the enzyme phosphomannomutase/phosphoglucomutase with a slow substrate and an inhibitor

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Aug 1;62(Pt 8):722-6. doi: 10.1107/S1744309106025887. Epub 2006 Jul 24.

Abstract

Two complexes of the enzyme phosphomannomutase/phosphoglucomutase (PMM/PGM) from Pseudomonas aeruginosa with a slow substrate and with an inhibitor have been characterized by X-ray crystallography. Both ligands induce an interdomain rearrangement in the enzyme that creates a highly buried active site. Comparisons with enzyme-substrate complexes show that the inhibitor xylose 1-phosphate utilizes many of the previously observed enzyme-ligand interactions. In contrast, analysis of the ribose 1-phosphate complex reveals a combination of new and conserved enzyme-ligand interactions for binding. The ability of PMM/PGM to accommodate these two pentose phosphosugars in its active site may be relevant for future efforts towards inhibitor design.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism
  • Binding Sites
  • Crystallography, X-Ray
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology
  • Ligands
  • Models, Molecular
  • Pentosephosphates / chemistry
  • Pentosephosphates / pharmacology
  • Phosphoglucomutase / antagonists & inhibitors
  • Phosphoglucomutase / chemistry*
  • Phosphoglucomutase / metabolism
  • Phosphotransferases (Phosphomutases) / antagonists & inhibitors
  • Phosphotransferases (Phosphomutases) / chemistry*
  • Phosphotransferases (Phosphomutases) / metabolism
  • Protein Conformation
  • Pseudomonas aeruginosa / enzymology*
  • Ribosemonophosphates / chemistry
  • Ribosemonophosphates / pharmacology

Substances

  • Bacterial Proteins
  • Enzyme Inhibitors
  • Ligands
  • Pentosephosphates
  • Ribosemonophosphates
  • ribose 1-phosphate
  • xylose 1-phosphate
  • Phosphotransferases (Phosphomutases)
  • Phosphoglucomutase
  • phosphomannomutase

Associated data

  • PDB/2H4L
  • PDB/2H5A