mβTrCP binds to phosphorylated IκBα. (A) In vitro binding. In vitro-translated 35S-labeled IκBα (lanes 1,2,4,5) or S32A/S36A mutant (lanes 3,6) was phosphorylated by a MEKK1-activated IκB kinase complex and incubated with 35S-labeled mβTrCP (lanes 1–3) or mβTrCPΔF (lanes 4–6) in RIPA buffer plus 0.1% SDS. Proteins associated with IκBα were coimmunoprecipitated with an IκBα-specific antibody and analyzed by SDS-PAGE. Lanes 7–10 show an aliquot of the in vitro-translated proteins, which is ∼40% of input in the immunoprecipitation experiments shown in lanes 1–6. (WT) Wild-type IκBα; (AA) S32A/S36A; (FL) full-length mβTrCP (wild type); (ΔF) F-box-deleted mutant of mβTrCP; (IP) immunoprecipitation; (IVT) in vitro translation. (B) mβTrCP forms a complex with phosphorylated IκBα, p65, and Skp1 in vivo. 293 cells were transfected with 3 μg of pcDNA3–Myc–mβTrCP (lanes 2,3,6,7,10,11) or pcDNA3-Myc-mβTrCPΔF (lanes 4,5,8,9,12,13). After incubating the cells with 20 μm of MG132 for 30 min, the cells were treated with (lanes 3,5,7,9,11,13) or without (lanes 2,4,6,8,10,12) calyculin A (0.1 μm) for 10 min. Cell extracts were immunoprecipitated with antibodies against IκBα (lanes 2–5), p65 (lanes 6–9), or Myc (lanes 10–13), respectively, and the precipitated proteins analyzed by immunoblotting with antibodies against Myc, Skp1, IκBα, and p65, respectively. Lane 1 is 10 μg of 293 cell extract that also expresses mβTrCP. (C) mβTrCP binds directly to p-IκBα. 293 cells were transfected with pcDNA3 containing Myc–mβTrCP, together with Flag–IκBα (F-IκBα, lanes 1,2) or Flag–IκBαΔN mutant (FΔN, lanes 3,4). Following treatment of the transfected cells with MG132 and calyculin A, the cell extracts were immunoprecipitated with an anti-Flag antibody (M2, Kodak), and the precipitated proteins analyzed by immunoblotting with antibodies against Myc, Skp1, IκBα and p65, respectively.